Lycium barbarum (goji berry): 132604281
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Entry
132604281 CDS
T09483
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lbb01002
]
132604281
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132604281
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132604281
Peptidases and inhibitors [BR:
lbb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132604281
Ubiquitin system [BR:
lbb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132604281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
GSG-1
Motif
Other DBs
NCBI-GeneID:
132604281
NCBI-ProteinID:
XP_060173710
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All DBs
Position
7:complement(126845659..126860339)
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AA seq
709 aa
AA seq
DB search
MDIPSPAVGCAVCGKVTSKQCSRCKKVKYCSEACQRSHWNSGHKSICRDFRSSVKGSSEQ
SVSTLQRRKSFAISLVPSSGKTKILNQPKKVLFPYEEFLEFFYWDNPGFPPCGLINSGNS
CFANVVLQCLTHTKPLVAYLLEKGHRRECRLNGWCFLCEFQLHVERASQSRQPFLAVSRL
SRLPNIGGNLTCGKQEDAHEFMRFAIDTMQLVSLDEFGGEKAVPPSTQETTLIQHIFGGH
LQSQVICTKCSNLSNQLENMMDLTVEIHGDAESLEECLDQFTAEECMDGENMYKCDRCND
YVKAWKRLMIQKAPNILTIALKRFQRGQFGKLNKMVTFPETLDLCPYMIEAGDGNYIFKL
YAVIVHVDVSNASYFGHYICYIKDFSGNWYRFDDSKVVNVDIGEVLSQRAYLLLYSRISA
RPTSLYPLESLNKEDRDIVKAEVKKHSSLQPLDCHNTTVSPAICVDSGSLPTENNSEIKV
VRAKEGLSSITNSEGGKEDQDMVESGASRFVLQEVQDVGVSSAEIQKPEGRVLISDIEEK
TETCEGTSNESLLESLGEDSVDTNGEMQYDASASASASASSSSEISEDMEVDNSTLLLEK
ANREKEFSSQGIHDVIQKTDGCTPPGKKLKPLLTPGFLGKCPRDECARKEVTGEVCQNST
LSGPTNACAEMGLSCESRDAAGNEHKSEEESSPSSNAVNEHTEMTLGKI
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggatattccgtcaccggcggttggttgcgccgtttgcggcaaagttacatctaagcaa
tgctcacgttgcaagaaggttaaatactgttctgaagcttgccaaagatcccattggaat
tcggggcacaagtctatctgtagagattttcgatcatctgttaaaggtagttctgagcaa
tcagtatcgactttgcaaaggaggaagtcttttgccatttcgcttgttccttctagtgga
aaaactaagatactaaaccagccaaagaaggtactttttccatatgaagaattcttggaa
ttcttttactgggacaatccaggcttccctccttgtggactcataaatagtggtaacagc
tgttttgctaatgtggttctgcaatgtctaacacacactaaaccacttgttgcctactta
ttggagaaaggccatcgaagagaatgtagattgaatggttggtgcttcctttgcgaattt
caactccatgttgaacgggctagccagagtaggcagccctttttagcagttagcagacta
tcacggttgcctaatattggtggtaatcttacttgtggaaagcaggaggatgcccatgag
ttcatgaggtttgctattgacacaatgcaattggtgtcccttgatgaatttggtggagaa
aaggctgtacctcctagcactcaggaaacaactcttattcagcatatatttggtggtcat
cttcaatctcaggtcatatgtacaaaatgcagtaatctctcgaatcagttagagaatatg
atggatctgaccgtagagattcatggggatgctgaatctttggaggaatgcttagatcaa
ttcactgctgaagagtgtatggatggtgaaaatatgtataaatgtgatagatgcaatgat
tatgtcaaggcatggaagaggctaatgatccagaaggcaccaaatatcctaacaattgct
ttgaaaaggtttcagagaggtcagtttggcaaactaaataagatggtgactttccctgaa
actttagatctttgtccttacatgattgaagcaggagatggcaattatattttcaagctg
tatgcagtgattgttcatgtggatgtgtcgaacgcatcatattttggtcattatatctgc
tacatcaaggatttcagtgggaattggtataggttcgatgacagtaaggttgttaatgta
gatattggtgaggtgctttcacaaagagcatacctgctgttatatagcaggattagtgcc
aggccgacatccttatatcctcttgaatcattaaataaagaggaccgtgatatagtcaaa
gcggaagtcaagaagcattcctcacttcaacctcttgattgtcataacacaacggtgtct
cctgctatatgtgttgattctggttcattgccaactgaaaataattcagagataaaggtt
gtcagggccaaagagggcttgtcctcaattactaactctgagggtggaaaggaggatcaa
gatatggtggaatctggggcaagtcgttttgtcttgcaggaagttcaggatgttggagta
tccagtgcagaaatacagaaacctgaagggcgagtccttatttctgacattgaggaaaaa
actgagacatgtgaaggaaccagcaatgagtctctattagaaagtttgggtgaggattct
gtagacacaaatggtgaaatgcagtatgatgcttctgcgtctgcctctgcctctgcctca
agctcatctgaaatttcagaagacatggaggtcgacaattccactcttttgctggagaag
gctaaccgcgaaaaagaattttcatctcaaggcatccacgatgtgatccagaaaacagat
ggatgtactcctcctggaaaaaagttaaagccactgttaacccctggttttcttgggaaa
tgcccacgggacgaatgtgctaggaaggaagtcacaggggaagtctgtcagaatagcact
ctttctggtccaacgaatgcatgtgcagagatgggcttatcttgtgaaagtcgtgatgca
gcgggcaacgagcataagtctgaggaagaaagttcaccatctagtaatgctgtgaatgaa
catactgaaatgacccttggcaagatttaa
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