Lycium barbarum (goji berry): 132604512
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Entry
132604512 CDS
T09483
Name
(RefSeq) protein DEHYDRATION-INDUCED 19 homolog 4-like
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132604512
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132604512
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132604512
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Di19_C
zf-Di19
zf-C2H2_4
Zn_SUZ12
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
132604512
NCBI-ProteinID:
XP_060174036
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Position
7:132366017..132371709
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AA seq
218 aa
AA seq
DB search
MDSDSWIRMSTSSRRHQARSDFYNIIEEYEGEEESRPEFLCPFCGEDFDIVGLCCHIDEE
HAIEAKNGICPVCAKRVGTNLVGHITQQHGNILKVQRKRRLRRGGTNSTLSILRKELREG
SLPSILRGSSHLVSSATSDPDPLLSSFINTSASVDEPPEVQPLSSALAACSTEESTVENL
SDRNIRPSPLSEKDQEEKARKCEFVQGLLLSTFLEDDF
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggattctgattcttggattcgtatgtctacttcttcaagacgtcaccaagctagatca
gacttctataatataatagaagagtatgagggtgaagaggagtcaaggccggagtttctg
tgccctttctgtggcgaggattttgatatagttggcctttgctgtcatatcgacgaagag
catgctattgaggctaagaatgggatatgccccgtttgtgctaaaagggttgggacgaat
ttggttggccatattacgcagcaacatggaaatattctgaaggtgcagcgcaagagacga
ttacgaaggggtggaactaattcaactctttctattttaagaaaagagctgagagaagga
agtctaccgtccattctcaggggatcttcgcacttggtttcttccgctacctcagatcct
gatcccctgttatcttcattcattaacacctcagcttcggttgatgaacctcctgaagtt
caacctctttcttctgctttagcagcatgctcaacagaagaaagcactgttgagaacttg
tctgacagaaatattcggccatctccactatctgaaaaagaccaagaagagaaggcaagg
aaatgtgagtttgttcaagggcttctgctgtcgacctttcttgaagatgatttctaa
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