Lycium barbarum (goji berry): 132604529
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Entry
132604529 CDS
T09483
Name
(RefSeq) protein argonaute 5 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132604529
03036 Chromosome and associated proteins [BR:
lbb03036
]
132604529
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132604529
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
132604529
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
132604529
microRNA pathway
RISC loading complex
132604529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
132604529
NCBI-ProteinID:
XP_060174057
LinkDB
All DBs
Position
1:164728785..164735980
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AA seq
982 aa
AA seq
DB search
MSDRGRGRRGGGGRGGGAGRTPSSSGGRTPSSSSGGRTPSTSGGRGGEWTSLSGGGRGRG
TVSAPRPMYQQPQPQPQPPVSSVTRSVEQLSLQPSSSTQPPPAPAPAITAVQPAPASGVQ
PPPASSKAVRVPARPGFGTAGRKILIKANHFLVQVADRDLHHYDITISPEVLSKKVCRDI
MKKLVEDYKQSHLGGRDLAYDGRKSAYTAGPLPFASKEFVVKFDNDSGGARREREFKVSI
KFAAKADLHHLKQFLQSRQSDAPQETIQALDVVLRATPSMNYEVVGRSFFHTSLGEKGRL
GEGLEYWRGYYQSLRPTQMGLSLNIDMSARAFYESIYVSDYVIGYLNLRDSNRFMSDVDR
LKVKRVLKSVKVEVRHSGIRRHKITGVSAQPVRDIMFSDDTGARTSVADYFREKYNIRLR
YPMLPAIQAGSTAKPVFLPMELCKIVPGQRYTKTLNGRQVTEMLRATCQRPHEREAIIKQ
IVSRNGYGTDEIVKEFGIEVGSELATIEARVLQPPMLKYHESGQEKRVDPRVGQWNMINK
KMFSGGKVDTWTCVSFSRVDPEPLCRALIDMCCSKGMVFHPEPLVPFRSAHSGQIEKTLG
AINEECTRKLAAMGHQVKHLQLLIVINPEVSGYYGTIKRVCETDLGIVSQCCLPKNVARP
NKQYLENLALKINVKVGGINSVLEQAVQGRIPFLTDMPTIVFGADVTHPQPGEDSSPSIA
AVVASMDWPAVTKYRGLVSAQPHRKEIIMDLYTEKEDPKKGVVRGGMIIEMLKAFRRSTN
LKPGRIIFYRDGVSEGQFNQVLLEEMDAIRKACNSLEEGYLPRVTFVVVQKRHHTRLFPA
NHNDRNLTDKSGNILPGTVVDTKICHPTEFDFYLCSHAGIKGTSRPTHYHVLFDENKFSA
DAIQNLTNWLCYTYARCTRSVSVVPPAYYAHLAAFRARYYIEDDVVDSRSTSGGGGATRE
QVREFRPLPTIHPNVTNVMFYC
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccgtggtcgtggacgtcgaggtggcggtggtagaggcggtggtgccggtcga
acaccgtcatcttccggtggtcgaacaccgtcatcttcctccggtggtcgaacaccgtcg
acttccggtggtcgtggtggagaatggacgtcgctttccggtggtggtcgtggtagagga
accgttagtgctccacgaccgatgtatcaacaaccacaaccacaaccacaaccaccggtt
tcatcggtcactcgtagtgtagaacagctttcacttcaaccttcttcatctacacaacct
cctcctgctccggcaccggcgataactgctgtacaacctgcgccggcgagtggtgtacaa
ccgccgccggcatcgtcaaaggcagttcgggttccggcgagacccggatttggaactgca
ggacggaagattcttattaaggcaaatcactttctcgttcaagttgctgaccgagatcta
catcactatgacatcacgatctctcctgaggttctgtcaaagaaagtgtgcagagacatc
atgaagaagctggttgaagactataaacagtcacacttgggtggtcgggatttagcatat
gatggtcgaaagagtgcttacactgctgggccgctcccattcgcctccaaggaattcgtt
gtcaagtttgataatgatagtggtggagcaaggagggaaagggagtttaaggtttccatt
aagtttgctgccaaagctgatcttcaccacttgaagcagttcttgcaatctaggcaatca
gatgccccacaagaaactatacaagctttggatgtggtgctgcgggcaactccatcaatg
aattatgaagtagtgggaaggtcgtttttccatacttcgttgggagagaagggtagactc
ggtgaaggtttggagtactggagagggtattatcagagtcttcgaccaactcagatgggc
ctttctctcaatattgatatgtcagccagggcattctatgagtccatttatgtctctgat
tatgttattgggtacttgaatctcagggattctaacaggtttatgtctgatgtggaccgt
ttgaaggtcaaaagggtcctgaaaagtgttaaggtagaggtacggcattcaggtattaga
cgccacaagatcaccggggtgtctgctcaaccagtgagggacataatgttttccgatgac
actggtgcaaggacttccgttgctgactacttccgagagaaatacaacattcgacttagg
tatccaatgttgcctgcgattcaggctggcagcactgcaaaacctgtgtttctgcctatg
gagctttgtaaaattgtcccaggacaaagatacacaaaaactttaaatggcaggcaggtc
acagagatgctaagggcaacctgtcaaagacctcatgagagagaggcaatcattaagcag
attgtgagccgtaacggatatggtactgatgaaatcgtgaaagaatttggtattgaagtt
ggaagtgagctcgccaccattgaagcacgggttctgcaacctccaatgctgaagtatcac
gagtccgggcaagaaaaacgggtggatcccagagtcgggcagtggaatatgattaataag
aaaatgttcagtggtggcaaggtagatacgtggacgtgtgtcagcttctcacgggttgat
ccagaaccgctctgcagggctctgatcgatatgtgctgtagtaaagggatggtgttccat
cctgagcctttggtgccctttcgctcagctcattctgggcagattgagaagactcttggt
gctatcaatgaagagtgtactcgtaagctagctgctatggggcatcaagtgaaacatctt
cagctgctaattgttattaatcctgaagtttctggatattatggaacgatcaaacgagtg
tgcgaaacagatttgggaattgtgtcgcaatgttgcctaccaaagaacgttgctagacca
aataagcaatatcttgaaaaccttgctctaaagataaatgtcaaggtgggtggaataaac
tctgtcttggagcaggcagttcaggggagaataccttttctcactgatatgcccacaatt
gtctttggtgctgatgtgacacatccacaaccgggagaagattctagtccctctatagct
gctgtggttgcgtcaatggattggcctgcagttactaaatataggggccttgtttctgca
cagccccataggaaagagatcattatggacttgtacacagagaaggaagatcctaaaaaa
ggggttgttcgcggcggaatgatcatagagatgctgaaagcgtttagaagatcgacaaac
ttgaagcctggtagaataatcttttatagagatggagtcagtgaaggacagttcaaccag
gttttgttggaagaaatggatgcaatccgcaaggcatgtaattcgctggaagaaggttat
ttgccacgagttaccttcgtggtagtgcagaagagacatcatacacgtctattccctgct
aatcataatgatcgtaacctgacagacaagagtggaaacattttgccaggtactgtggta
gataccaagatttgccaccctacggagtttgatttttacttgtgtagccacgctggaatc
aagggtaccagtcgtcccacacattaccatgtactgtttgatgagaacaaattcagtgca
gatgccattcagaatttaacaaactggctgtgctacacgtatgcaaggtgtacacgatca
gtttctgtagtgccacctgcctactatgcacatctagcagcctttcgtgcacggtattac
attgaagatgatgtggtggattccagatcaactagtggaggtggtggagcaaccagggag
caggtgagagaattcagaccacttccgacgattcatccgaatgtgacgaatgtcatgttt
tactgctaa
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