Lycium barbarum (goji berry): 132604575
Help
Entry
132604575 CDS
T09483
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132604575
03036 Chromosome and associated proteins [BR:
lbb03036
]
132604575
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
132604575
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
132604575
SLIK complex
132604575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
CHDCT2
Motif
Other DBs
NCBI-GeneID:
132604575
NCBI-ProteinID:
XP_060174116
LinkDB
All DBs
Position
7:complement(133130497..133153436)
Genome browser
AA seq
1706 aa
AA seq
DB search
MAFYRNYSNETVTLDDKSQGEQRMQGIHQDVGNEELEGSLSDNDDNGQLQDEVGVEVETA
AEDQVPPGRRVNLAGKWGSEFWKDCQPMGPSGRSGSGEESKSGSEYKNEEEFDEVSDGRE
DQLESEDEGRRKEMGKSRNVPVDEMLSDEYYEQDGDDQSDSLHYRAANPSSRYSSKPQSR
PVVASKYAGRKSKASKDQYDDDYADYEDDDSEDEDDPDDPDYGSTGRGKGIKDKDDDWEG
GESDEVNSDDDEMGISDEDEEYYRKPQGKQKNRATHSVKSTREVRSLATSARRKRGRTYE
EEESSEHDSENESDEDFGNKPRRVANLRLKNGGRSTAASVSGRNTEVRTSSRRSARKVSY
AESEESEEVDESKQKKSQKEEIEEEDGDSIEKVLWHQPKGMAEEARMNNKSADPMLLSHL
YDSEPDWNEMEFLIKWKGQSHLHCQWKSIVELQNLSGFKKVLNYTKRVMEDVKYRKTVSR
EEIEVNDVSKEMDLDIIKQNSQVERVIADRISKDGYGNVVPEYLVKWKGLSYAEATWEKD
VAIAFGQDAIDEYKAREAAIMLQGKSVDFQRKKSRGSLRKLEEQPEWLKGGKLRDYQLEG
LNFMVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKE
FRKWLPDMNVIIYVGARASREVCQQYEFYNDNKVGRTIKFDALLTTYEVLLKDKAVLSKI
RWNYLMVDEAHRLKNSEASLYTTLLEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFK
SKDEFVQNYKNLSSFNELELANLHKELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQK
QYYKWILERNFQDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDANYFGSTK
LERIILSSGKLVILDKLLDRLHETKHRVLIFSQMVRMLDILAEYLSIKGFQYQRLDGSTK
SELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH
RIGQQDVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGKLEKKETKKGSLFDK
NELSAILRFGAEELFKEDKNDEESKKRLLSMDIDEILERAEKVEERGAEAEEGNELLSAF
KVANFCGAEDDATFWSRWIKPEAVSHAEDALAPRAARNKKSYAEASPLVETNKRKKGVDA
QERFPKRRKGDFSCTLPAIDGASAQVRGWSYGNLSKRDATRFSREVKKFGNDSQIDKISL
EVGGAVQAAPTEAQVELFDSLIDGCREAVKGEVADPKGPLLDFFGVPVKADELLGRVEEL
QLLAKRISRYEDPVSQFRALANLKPATWSKGCGWNQKDDARLLLGIHYHGFGNWENIRLD
ERLGLMKKIAPVELQHHETFLPRAPQLKERASQLLQMEVAAVGGKNANLKVGRKASNKQK
ESLHSSTAPLGKGKQSKLSSSGLNVKMGRGRAAKGQKVEPLVKEEGEMSDNDEVYEQFKE
VKWMEWCEDVMAEEEKTLKRLHRLQTTSDDLPKDKVVVKVRNYLQLLGRRIDQIVLEYEK
EPHKQERMTVRLWNYVSTFSNLSGEKLRQIYSKLKPDQPVEGRVGPSQFNGSASGHPTTG
FEPRGFDAAKFEAWKRRKRADADVHSQVQPQHQRTLTNGTRLPEPNLSSGILGAAPLDGK
QSGNSRPYRTHQSGVPQRPGFSSRPR
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggctttttataggaactattcgaatgaaacggttacattggatgacaaaagccagggg
gaacagagaatgcagggaatacatcaggatgtaggaaatgaggaattggaaggtagtttg
agtgataatgatgataatggtcagctacaagatgaagttggtgtagaagtggaaacagca
gcggaggatcaggtgccgcctggaagaagagttaatttggctgggaaatggggttctgag
ttttggaaggattgtcaaccgatgggcccctcaggtaggtctggctctggagaggagtcg
aagagtggatcagagtataagaatgaggaagaatttgatgaggtatctgatggtagggaa
gatcagttagagtcggaagatgaaggaaggcggaaggaaatggggaagagtcgaaatgtc
cccgtggatgagatgttatctgatgaatattatgaacaagacggtgatgatcagagtgac
tcgttacattacagagctgctaacccttcaagcaggtatagttcaaagccgcagtcaagg
cctgttgttgctagcaagtatgcaggtaggaagtcaaaagcttcgaaagatcagtatgat
gacgattatgctgattatgaggatgatgacagcgaagatgaagacgatcccgatgatcct
gattatggtagcacaggtcgtggaaagggcattaaggacaaggatgacgactgggaaggt
ggagagtctgacgaggtcaacagtgatgatgatgagatgggcatctccgatgaagatgaa
gaatattacagaaaacctcaaggcaagcaaaagaatagggccacgcatagtgtaaaatct
accagagaagttaggtctcttgctacatctgctcgacggaaaaggggtagaacatatgaa
gaggaagaatcatcagaacatgattctgaaaatgaaagcgatgaggattttggaaataaa
cctaggagagttgcaaatctccgcctgaaaaatggtggtagatctactgctgctagtgta
tctggcaggaatactgaagtccgaacttcgagtcgtcggtctgctcggaaagtttcatac
gcggagagtgaagaaagtgaagaagttgatgagagcaagcaaaagaagagccaaaaggaa
gaaattgaagaggaagatggtgactcaattgagaaagttctgtggcatcagccaaagggc
atggctgaagaagctagaatgaataacaaatcagctgatccgatgttgttgagtcatttg
tatgactctgaaccagattggaatgagatggagttcttaataaaatggaaaggccagtct
catttgcattgtcaatggaagtcaattgttgagctacaaaatcttagtgggtttaagaag
gtcttgaattataccaaaagggtcatggaggatgtgaagtatcggaagactgtatcccgc
gaggagatcgaggtaaatgatgtgagcaaagaaatggacttggatatcatcaaacagaac
agtcaggttgagagagttattgcagacagaatcagcaaagatggttatggtaacgtggta
ccagagtatttagttaaatggaaagggctatcttatgctgaagcaacttgggagaaggac
gttgctattgcttttggtcaagatgccatcgatgagtacaaggctcgtgaggctgccatt
atgttacaagggaaatcagtggatttccagcgcaaaaagagcagaggaagtttgaggaag
cttgaagagcagcctgaatggttaaagggtggaaaacttcgggattatcagctagaaggg
ttaaattttatggttaacagttggaggaatgatactaatgttatattagctgatgaaatg
ggcctcgggaaaactgttcagtcagtttcaatgctcggttttctacagaatgctcagcaa
attcatggaccatttctggttgttgtcccattatcaactctctccaattgggcaaaagaa
tttaggaaatggctgcctgatatgaacgttattatctatgttggagcacgtgctagtcgt
gaggtctgtcaacaatacgaattctacaatgataataaagttggtaggactatcaaattt
gatgcgctgcttactacttatgaggtacttttgaaggacaaggcagtgctttcaaagata
aggtggaactaccttatggttgatgaagcgcataggttaaagaacagcgaggcttctctt
tatacaacacttttggagtttagcacgaaaaacaagttgcttatcactggtactccattg
cagaacagcgttgaagaactatgggccttactccactttcttgatcctgataagttcaag
agcaaggatgaatttgttcagaattataagaatcttagttcgtttaatgaactggagctt
gcaaatcttcacaaggaattgaggcctcacattcttaggagagtcataaaagatgtggag
aagtcacttcctccaaagattgaacgaattcttagggttgagatgtcaccgcttcagaaa
cagtattacaaatggatcttggaaaggaattttcaagacttgaataaaggtgttcgtggg
aatcaggtttcacttttaaatattgtggtggagttgaaaaaatgttgcaatcaccccttt
ttatttgaaagtgccgaccatggttatggtggggatgcaaattattttggcagcacaaaa
ttggaaagaattatacttagcagtggtaagcttgttatacttgacaagctgctggacaga
ttgcatgagacgaagcaccgagtgttgatattttctcagatggttaggatgctggatata
ctggcagaatacttgtctatcaaaggattccaataccagcggcttgatggtagtactaag
tctgagttacgccagcaggctatggaccactttaatgcacctggtagtgatgacttctgt
tttcttctctcgacgcgagctggtggattgggtataaatcttgcaacggcagacacagtt
atcatatttgattctgattggaatccccaaaatgacttgcaggcaatgagtagagctcat
aggatagggcaacaagatgttgtcaacatctacagatttgttacaagtaaaagtgtggag
gaagatatcttggaacgtgctaagaagaagatggttcttgaccatctggtgattcagaaa
ctgaatgcagagggtaaattagagaagaaagaaaccaagaaaggaagtctctttgataag
aatgagctctctgcaattttgaggtttggggctgaggaactatttaaggaagacaaaaat
gatgaagagagcaagaagaggcttcttagtatggatattgatgaaattcttgaacgggct
gaaaaggttgaagagagaggagctgaggcagaggaaggaaatgagttactgagtgctttt
aaggttgccaatttctgtggtgctgaagatgatgcaactttttggagtcggtggataaag
ccagaagctgtttctcacgctgaagacgctttggctcctcgagctgctcgaaataaaaag
agttatgccgaagctagccctctggtggaaactaataaaagaaagaagggtgttgatgct
caggagaggttcccaaagcgtcgtaagggagattttagctgcacacttccggcaattgat
ggtgcgtccgctcaagtgagaggatggtcttatgggaacttgtcaaagagagatgccaca
cgtttttcccgtgaggtcaagaagtttgggaatgatagccaaattgacaaaatttcatta
gaggttggtggggcagttcaagcggcgccaactgaagctcaagttgagctttttgactca
ttaattgatggttgtagagaagcagttaaaggtgaagttgctgacccaaaggggccactc
ttagatttttttggtgttcctgtgaaggctgatgaactactgggccgtgttgaggagctt
caactcttagcaaagcgtatttctcggtatgaggatcccgtctcacagttccgtgctttg
gctaatctaaaacctgcaacttggtctaaaggttgtggctggaaccagaaggatgacgcc
aggctgcttctcggaattcattatcacggatttggcaattgggaaaatatacggttagat
gaaagacttggcctcatgaagaagattgctcctgtggaactgcaacatcatgagactttc
ttgccacgggctccgcagttgaaggagagagcttctcaacttctgcaaatggaagttgca
gctgttggcgggaagaacgctaatttaaaagtgggccgtaaggcttccaacaagcaaaaa
gaaagccttcacagctccacagcacctcttggaaagggtaagcaaagtaaactaagctca
tccggattaaatgttaaaatgggtagaggcagagctgcaaaaggtcagaaggttgaaccg
ttggttaaagaggaaggtgaaatgtcagacaatgatgaagtttatgagcagtttaaagag
gtgaaatggatggaatggtgtgaagatgtgatggcggaggaggaaaagacgcttaagcgt
ctccacagattgcagactactagtgatgatctcccaaaggacaaggtggtagtcaaagta
cggaactacttgcagcttcttggtcgcaggattgatcaaatagttctcgaatacgagaag
gaaccgcataagcaagaaaggatgacagtccgtttatggaattatgtatcaacattttca
aatttgtctggcgagaagcttcgtcagatttattctaaacttaaaccggaccaacctgta
gaaggaagggtaggaccgtcacaatttaatggttctgcttccgggcatccaacaacaggg
tttgaaccccgaggttttgatgctgccaaatttgaagcatggaaacgaaggaaaagagct
gatgctgatgttcattcccaagttcagccccaacatcaaagaactttgactaatggtaca
cgccttcctgaaccgaacttatcatctgggattcttggcgcagctcctttagatggcaaa
cagtcgggtaatagtaggccttacagaacgcatcagtctggcgtgcctcaaagaccaggt
ttctcgtccagacccagatag
DBGET
integrated database retrieval system
