Lycium barbarum (goji berry): 132604622
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Entry
132604622 CDS
T09483
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT3-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00270
Cysteine and methionine metabolism
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
132604622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbb03000
]
132604622
03032 DNA replication proteins [BR:
lbb03032
]
132604622
03036 Chromosome and associated proteins [BR:
lbb03036
]
132604622
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lbb02048
]
132604622
Enzymes [BR:
lbb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
132604622
Transcription factors [BR:
lbb03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
132604622
DNA replication proteins [BR:
lbb03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
132604622
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
132604622
Prokaryotic defense system [BR:
lbb02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
132604622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Chromo
BAH
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
132604622
NCBI-ProteinID:
XP_060174195
LinkDB
All DBs
Position
7:134417201..134425973
Genome browser
AA seq
948 aa
AA seq
DB search
MPSKRKASPATKPELSPASRKSKRRVVVEKPDPVAAVVLDDSDFESEQPVKKSSTRRRKK
AESSSVVAACQSENSDRKSKRRTKIDEDPVVACQSGSSDMKTKSPAVEKAEVSVVADSDF
VSEFDSTKQAAIKAESVVDLHDAESDFVEDEDETEQGSLKKNLSISPSKRKPKRVENVKD
EECVFVGEPIPDAEARQKWPHRYNKGNANCTKSINGQDDSDQLIQAKRHYSQAEVDGLIY
YLEDDAHVKADDGEDDYICKIVEFFEAVDGVQYFTAQWFYRAKDTVIKRHDQFIDKKRVF
LSEIKDDNPIDCLVTKLKIVPVPSNATLQFKENVKSNCDFYYDMKYLLPYSSFISLPPDS
TSPVSSSSTISSDVDAGEIKEHNLEKKLLDLYSGCGAMSTGLCLGANSKGVKLVTKWAVD
LNPYACDSLRLNHPETQVRNEYASDFLSLLKEWVQLCVSCSLVKSSVPPHPLLKVTDEVE
EEENDDEDDDSGDVKEGEIFEVEELLEVCYGDPNNINKPGLYFKVRWRGYGPEEDTWEPI
DGLSECPKKIKEFVAKGFKANLLPLPGDVDVVCGGPPCQGISGFNRFRNKENPMDDPKNK
QLDVYMDIVDFLKPKFVLMENVVDLIKFADGFLGRYALSRLVGMNYQARMGMMAAGAYGL
PQFRMRVFMFGAVSSEKLPQYPLPTHKVIVRGVIPTEFESNTVAYDQGGELELKKELFLG
DALSDLPSVGNNEPSDEILYTDEPKSDFQHFIRLGRDGVLGSVLYDHRPLKLNDDDYQRV
CQIPKRKGANFRDLPGVRVRPDNKVEWDPDVERVKLPSGKPLVPDYAMSFVGGSSSKPFG
RLWWDETVPTVVTRAEPHNQTIIHPLQDRVLTIRENARLQGFPDYYKLIGPIKERYMQVG
NAVAVPVARALGYSLAMSMKGLSGETPLFSLPKNFPSHEEQICNEVSQ
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcaaacgtaaagcatctccggcgactaaaccggagttatctccggcgagtagg
aaatcgaagagacgtgtggtagttgaaaaaccagatccagtagcagctgtagtgttagat
gatagcgattttgaatctgaacaacctgttaagaaatcatctactagacgaagaaaaaaa
gctgaaagtagttcagttgttgcagcttgtcaatctgagaacagtgatagaaaatcgaaa
aggcgaacaaaaatagatgaagatccagttgttgcttgtcaatctggaagtagtgatatg
aagacgaagagtccagctgtagaaaaggctgaagtatctgttgtagctgatagcgatttt
gtatcggagtttgattcgacgaaacaagcggcaataaaggcggaatccgtggtggatctt
cacgatgctgagagtgattttgtggaagatgaagatgaaacagagcaagggagtttgaaa
aagaacttgtctatttcgccttcgaaaaggaaacctaagagagttgagaatgtgaaagat
gaagagtgtgtatttgtaggtgaacctataccggatgcagaagctcgacaaaagtggcct
catcgctataataaggggaacgcaaattgtactaagagcataaatggtcaggatgattcg
gaccagttaattcaagctaagcgccattatagtcaagcagaggtggatggtctgatttat
tatctcgaggatgatgcacatgtaaaggctgatgacggtgaggatgattacatctgtaag
attgttgaattctttgaagcagttgatggcgtgcagtactttacagctcaatggttttac
agagctaaggatactgttattaaaaggcatgatcagttcattgacaagaagcgtgtattc
ctttctgaaatcaaggatgataaccctatcgactgtcttgtgacaaaactcaagattgtt
cctgtgccttcaaatgcaactttacagttcaaggaaaatgtaaaatcaaattgcgatttt
tactatgacatgaagtacctgcttccatactcttctttcattagcttgccgcctgacagt
acaagtccagttagttcatcttctacaatatcaagtgacgttgatgctggtgagatcaaa
gagcacaatctggaaaagaagctcttggatctatattctggatgtggagcaatgtccacg
gggctatgcctgggtgctaatagcaaaggcgttaaacttgttactaaatgggctgtcgac
ctcaacccatatgcatgcgacagcttgagattgaaccacccagagactcaggtgaggaac
gagtatgccagtgacttcttatcacttctgaaggagtgggtgcagctttgtgtctcatgt
tccttggtaaaaagcagtgttcccccacaccctcttttgaaagtaacagacgaagttgaa
gaagaagaaaatgatgatgaagatgatgattctggtgatgttaaagagggtgaaattttt
gaggtcgaagaacttttagaagtttgttatggagatccaaataacattaacaagcccgga
ctttacttcaaggtacgatggagaggttatggcccagaggaagacacctgggagccaata
gatggcttaagtgaatgcccgaagaaaataaaagagtttgtggccaaaggcttcaaagca
aatcttttgccattgccgggggatgttgatgttgtatgcggtggaccaccttgccaagga
atcagtggattcaaccgttttaggaataaagaaaatccgatggacgatccaaaaaataaa
caacttgacgtctacatggacatagtggatttcctgaaaccgaagtttgtattaatggag
aacgtggtggaccttatcaaatttgccgatggtttccttgggcggtatgcattgagcaga
cttgtagggatgaactaccaagcacggatggggatgatggcagctggtgcttatggtctt
ccgcaatttcgtatgcgcgtgttcatgtttggtgctgtttcgtcagagaagttgccacaa
tatccattgcccacgcataaagttattgtgaggggtgttattcctactgagtttgagtca
aacacagttgcatatgatcaaggcggggaacttgagttaaagaaagaactctttcttggt
gatgccctttctgatcttccttcggtggggaataatgagccaagtgatgaaattctttac
actgatgagcccaaatctgatttccagcattttataagattggggagggatggggtgctg
ggaagtgttctatacgatcatcgtcctcttaagctgaatgatgatgactatcagcgtgta
tgtcaaattcccaagcggaagggtgcaaacttcagggacttgcctggagttcgtgttcgg
ccagataataaagttgaatgggacccagatgtggagagagtaaaactaccctcggggaag
cctttggtccctgactatgctatgagcttcgttggtggtagttcctcaaaaccatttggt
cgtttgtggtgggacgaaactgtaccgacagttgtgacaagagctgaaccccataatcag
acaataatccatccactccaagatagagtgcttacaattcgtgaaaatgcaaggcttcaa
ggttttcctgactactacaaattgattgggccaataaaagaaaggtacatgcaagtaggt
aatgcagttgctgtcccagttgcccgagctctaggctattctttggccatgtcgatgaag
ggattatctggagaaacgccattgttctcattgccaaaaaacttcccctctcatgaagaa
cagatttgtaatgaagtgtcccaataa
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