KEGG   Lycium barbarum (goji berry): 132605667
Entry
132605667         CDS       T09483                                 
Name
(RefSeq) elongator complex protein 2 isoform X1
  KO
K11374  elongator complex protein 2
Organism
lbb  Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lbb03016]
    132605667
Transfer RNA biogenesis [BR:lbb03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    132605667
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_HPS5 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR11_1st Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 132605667
NCBI-ProteinID: XP_060174810
LinkDB
Position
8:2424427..2434356
AA seq 815 aa
MEVKRVFIGAGCNRVVNNVSWGASGLLSFGSQNAVAIFDPKTAQILTTLPGHKASVNCTL
WLPNSKFAFKAKHMEQHFLLSGDAEGVIILWEYSLVDAKWRYVLQVPQAHKKGVTCITAI
MVSQEEAVFASASSDGTVNVWEIVLPSTRGGDCKLSCSDSLFVGQKPMVALSLAELPGNS
KQLVLGMGGLDSKIHLYCGERNGKFARACELKAHTDWIRSLDLSLPVYVNGETSLLLVSS
SQDKGIRIWKMTLQDSSANNKKQQTSLASYIKGPVLVAGSSSYQISMEALLIGHEDWVYS
VEWQPPSTECFQPQSILSASMDKTMMIWKPEKTTGIWMNVVTVGELSHCALGFYGGHWSP
NADSILAHGYGGSFHLWRNVGVDFDDWKPQKVPSGHFAAVSDIAWARCGEYMMSVSHDQT
TRVFAPWLNNTSSENEESWHEIARPQVHGHDINCVTVIKGKGNHRFVCGADEKVARVFES
PLSFLKTLSHVTSDDPSFSADIPADVQILGANMSALGLSQKPIYVQAASTPTDRSNTEGF
DTLETVPEAVPVVLTEPPIEEQLAWHTLWPETHKLYGHGNELFALCCDHHGKLVASSCKA
QSAPVAEIWLWQVGTWKSVGRLQSHSLTVTQMEFSHDNQYLLAVSRDRHFSVFRIDHKGT
DEINYQLVAKQEAHKRIIWACSWNPFGQEFATSSRDKTVKIWAVETETSVKLLLTLPTFK
SSVTSLSWLGLDSHGNRGLLAVGMENGLIELWNLNGHLSVQNASLAVKFDPFLCHVSTVQ
RLSWRSPQKSKDSETVQLASCGADHCVRIFRVKVT
NT seq 2448 nt   +upstreamnt  +downstreamnt
atggaagtaaagagagtgtttataggagcaggctgtaacagagttgttaataacgtctct
tggggtgcttctggtttactctctttcggttcccaaaatgccgttgccattttcgaccca
aagactgctcaaatattgactacactacctggtcataaagcttctgtgaattgtacactt
tggcttcccaatagcaagtttgcattcaaagctaagcatatggaacagcattttttgctt
tctggagatgcagaaggtgtaataattctatgggagtattctcttgtggatgccaagtgg
agatatgtcttacaagtgccacaagcccacaaaaaaggtgttacctgcatcacagcgatc
atggtgtctcaggaagaagctgtttttgcatctgcatcctctgatggcactgtgaatgta
tgggaaatagtacttccatctactcgtggaggtgattgcaaattgtcatgctcggattct
ctgtttgttggtcagaaacctatggttgctctttcactagcagagctcccagggaatagc
aagcagctggttctgggcatgggaggattggacagcaaaattcatctatattgtggtgag
agaaatggaaaatttgctcgtgcttgtgagttaaaggctcacacagactggattaggagt
ttagatctctcattgcctgtgtacgtgaatggtgaaactagtcttctacttgtaagttca
tctcaagacaaaggcatacgcatatggaagatgaccttacaagactcttcagctaataac
aagaagcaacaaacaagcttggcttcttacattaaaggtcctgtgcttgtagctggctcg
tcctcttatcagatctctatggaagctctcctcattggacacgaagattgggtatactca
gtggaatggcagcccccatcgactgagtgttttcaaccgcagagcattttatctgcatca
atggataagacaatgatgatctggaaacctgaaaagacaactggtatctggatgaatgta
gttaccgttggggaattaagtcactgtgctttgggattttatggtgggcactggagtcca
aatgcagattctattttagctcatggatatggtggatcttttcacctttggagaaatgtt
ggtgttgattttgatgattggaagccacaaaaagttccatctggacactttgctgccgtg
tcagacattgcctgggctagatgtggggaatatatgatgtctgtcagtcatgatcagaca
actagagtatttgctccttggcttaataatacaagctcagagaatgaagaatcttggcat
gaaatagctcgccctcaagttcatggtcatgacataaattgtgtcacagtaatcaaagga
aaaggaaaccatcgttttgtttgcggggcagacgagaaagttgccagagtttttgaatct
cctttatcctttctgaagacattgagccatgttacgtcagatgaccctagtttttctgct
gacattccagctgatgtgcagatattaggggcaaatatgtctgctttaggtctatcgcag
aaacctatatatgttcaggcagcatcgacaccaacagacagaagcaatacggaaggtttt
gatacgctagaaactgttccggaagcagttccagttgtcttgacagagccacctattgaa
gagcaattggcatggcatactttatggccggagacacacaaactctatggtcatgggaat
gagctttttgctctatgttgtgatcaccatggaaagcttgtagcttcttcctgcaaggct
caatcagcaccggttgctgaaatatggctatggcaagttggtacgtggaagtcggttggc
cgtttgcagtctcacagtttaacagtgacccaaatggagttctctcatgataaccagtat
ctgttggctgtttcaagagatcgccacttctctgtttttcgaatcgatcataaaggaact
gatgagatcaattaccagcttgtagctaagcaagaagcacataaaagaataatatgggca
tgttcttggaacccatttggccaagaatttgctaccagttcaagggacaaaactgtcaaa
atatgggctgtggaaactgaaacctcggtgaagctacttttgacacttcccactttcaaa
agcagtgtcacttccctgtcttggttaggtctagacagccatggcaatcgcgggcttctt
gctgtgggaatggaaaatggcctgattgaactttggaatttaaatgggcatttatcagtc
caaaacgcttctcttgctgttaaattcgatccatttctatgtcacgtgtccactgtccaa
cgactatcttggagaagtccccagaagagcaaagattctgagaccgtgcagcttgcctcc
tgcggagctgatcattgtgtgagaatatttagggtaaaggttacctaa

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