Lycium barbarum (goji berry): 132606062
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Entry
132606062 CDS
T09483
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132606062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbb03041
]
132606062
Spliceosome [BR:
lbb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
132606062
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
132606062
NCBI-ProteinID:
XP_060175359
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Position
8:complement(25659436..25672921)
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AA seq
781 aa
AA seq
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MDRDSSENEKSSRDKHRSDEHRHHRSSKHRSEDGHRRSEREGSRERKDESVEKKNSHKRK
EREESGNVDEQRARSGHSRDKDEERRDRRRFDDNKSKETHEQRRGTGSQIKADNARDDAV
GSIAKGVTMGSYNVTSRTSPDNCLAHGDSPAIKVSSLTTTKDKGVNINGSHQIPGKSSTD
GAASGAGKSGSLSLDALAKAKRALQMRKELAEKFKKIPALNKNKGANFTREGIPEVGPKE
SLQPSANAGIFATPVAYSDSAPSTSIFAAAASTNPPPSGLLHLSGLTAQKYEAVKRAQEL
AAKMGFRQDPEFAPLINMFPGQMPPEVALQPKPAKAPVLRLDALGREIDEQGNIVNMSKP
SSTLKVNINKKKQEAFQILKPELEVDPEKNPHFDPNMGIDKNKILRPKRMTFQFVEEGKW
SRDAEIIKLKSQFGEARAKELKAKQAQLTKAKAEPDINPNLIEVLERVIITKEKQKEPIP
EVEWWDAPLLRSGTYGDVVDGNVTNEHLKIEKITIYVEHPRPIEPPAEPAPPLPQPLKLT
KKEQKKLRTQRRLAREKERQEMIRQGLVEPPKPKVKMSNLMKVLGSEATQDPTKLEMEIR
SAAAEREQAHVDRNIARKLTPDERREKKERKLFDDPNIAPETIVSVYKINDLSHPQTRFK
VDVNAQENRLTGCAVISEGISVVVVEGGKKSIKRYGKLMLRRIDWAAAVKKEDDEGEGEG
EDEDKPLNKCVLVWQGSVAKSSFHRFFVHECRTEAAARKVFADAGVPHYWDLAVNFKDDE
F
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggatagggattcatcagagaacgagaaatcaagcagagacaaacatcgtagcgatgag
caccgccatcaccgtagttcgaagcatcgatccgaagacgggcaccgccgatctgaaaga
gaaggaagccgtgaaagaaaggatgaatccgtggagaaaaagaattcgcataagaggaaa
gagcgagaagaaagtggcaatgtggatgagcagagagctagaagtggacattcgagggat
aaggatgaggagagaagagatagaaggaggtttgacgataataaatcaaaggagactcat
gaacaaaggaggggaactggatctcaaattaaagctgataatgcccgggatgacgctgtt
ggttccattgctaagggtgtgacaatgggatcatacaatgtgacgtcaaggacttcgcct
gataactgtttggctcatggtgattctccagctatcaaggtatcttcgcttactaccaca
aaagataagggagttaatattaacggatctcatcaaattcctgggaaatctagtacagat
ggggcagcttctggtgctggcaagagtgggagcttatcccttgatgctttagcaaaagcg
aagagagctttacaaatgcgtaaggagttggctgaaaagtttaagaagatacccgcacta
aacaagaacaagggcgccaactttacgagagagggaattccagaggtgggacccaaggag
agccttcaaccttcagctaatgcagggatttttgcgactccagttgcatattctgattca
gcaccaagcacatcaatttttgctgctgcagcttctacaaatccaccacccagtggtttg
cttcatctctcggggctcacagcacagaaatatgaagcggtaaagcgtgcacaggagctt
gctgctaagatgggattccgacaggacccagagtttgctccccttataaacatgtttcct
gggcaaatgccaccagaggttgcccttcagccaaagcctgcaaaagcccctgttcttcga
ttggatgctctaggcagggaaattgatgagcagggaaatattgtcaatatgtctaagcca
tctagcacccttaaggtgaacatcaataagaagaaacaagaagcatttcaaattctcaaa
cctgaattagaggttgatcccgagaaaaatccccattttgatccaaacatgggcattgac
aagaacaaaatattgaggcccaagaggatgacatttcagtttgtggaggaagggaaatgg
tccagagatgcagaaataatcaagttaaagagccaatttggtgaagcaagagccaaagag
ctaaaggcaaaacaagcacagttgaccaaggctaaagcagagcctgacataaatccgaat
ctcattgaggtattggaaagggttattatcaccaaggaaaagcaaaaggaacctattcct
gaagttgagtggtgggatgctcctctgttacgatctggtacttatggtgatgtagttgat
ggtaacgtaactaacgaacacttgaagattgaaaagatcaccatatatgttgaacaccct
cgccctattgagcctcctgctgaaccagctccacctcttccccagccattgaaactaacc
aaaaaggagcaaaagaaacttcgaacccagcgaagactggccagggagaaagaaagacaa
gaaatgatacgtcaaggcctggtagaaccaccaaagcctaaagttaaaatgagcaatcta
atgaaagttcttggctcagaagccacacaggatcctacaaagcttgaaatggagattaga
agtgctgctgctgagcgggagcaggctcacgttgacaggaatattgctcgtaagcttact
cctgatgagcgtcgtgagaagaaagagaggaaactttttgatgacccaaatatcgctccg
gagactattgtttcagtatacaaaattaatgacctctcccacccacaaactcgcttcaag
gttgatgttaatgctcaggagaatcgcttgaccgggtgtgcagtgatctcagaaggtatt
agtgttgttgtagttgaaggtgggaaaaaatcaatcaagcgatatgggaaacttatgctt
aggagaattgattgggcagctgctgttaagaaagaagatgatgaaggtgaaggtgaaggt
gaagatgaagataagcctctcaacaagtgtgtgttggtctggcaagggagtgttgctaaa
tcaagcttccacaggttttttgttcatgagtgcaggactgaggctgctgctcgtaaagtt
tttgctgatgctggggttcctcattactgggatcttgctgtaaacttcaaagatgacgaa
ttttaa
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