Lycium barbarum (goji berry): 132606141
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Entry
132606141 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132606141 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132606141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132606141
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132606141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiport_2
Motif
Other DBs
NCBI-GeneID:
132606141
NCBI-ProteinID:
XP_060175483
LinkDB
All DBs
Position
8:48391363..48449107
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AA seq
1964 aa
AA seq
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MGELTVDGSLWWEPFTHLVAELESVSLSSGLPPTLEKKIKDNHAWFLDTISLFKPPNQKS
REALDATRLKIGLHQITVETDKKEAALKISSALCLDEVQSYILVHRTIIQNSIVSDGVFR
ELPHLVMLQYYLERQCLLKCTRQIIMQALYIAPRSQDASIVDEAQRLISDGLDRKLFSVL
QENLSSNFPKNMDVDLYTLWAEEIVTEDNLILDVLFLIFYEFCPCTGELWKKFCSLYEGF
VSNSYNFGKLAVSAEAVSSIYHAKLQLLLILIETLDLENLLQMVHDEIPFRQGYVTFSLS
EVQEIDAIVSAFDVFENKESGPLILAWAVFLCLISSLPEKEENNILMEIDHIGYVRQAFE
AGSLSSFLEIIENDRLKDFDYFQGPIAGFRSVLRTFLSAFIASYEINLQLGDGNLKLILD
ILCNIYQGEESLCTQFWDRESFVDGPIRCLLCNLEGEFPFRSAELLQLLSSLCEGAWPAE
CVFNFLDKSTGLSSPVDISSCSVVDDASQTVMAAQPLHLPGIEGLVIPSGTRGHLLKMID
RNIALVRWEFSQSGVFMLLLHLAQGLYLEKTNEIVMTLGLLSRLVTFNMGVCSALLDLRG
YMHDEMNSPMEHLRVNVAEIICSWIKSLSPNCSGVALMSTGVNILAKMLKCSPYHVSRLI
VQANIFDVAFKTNPFKIGSSGLSSGSWLLSGRLAKMLWIDCEQNDCQLTLSVLDLTMQLM
DSGMENDVVLGLVIFSIQYVLVNHEFWNYKIKHARWKVTVKVLEVLKKCILSISYIQKLG
EVVRDILLGDSSIHNALFRLVCTTSDGLEKLYFSRLYGLTEIEGLQQAIILVLDILSSML
SDLSRDVPSFTLFYQAIMSPTTKPVPLVTAAISLMSFFRNPKIQVGAARLLSRLFIIGDG
LQSYALSNAYFGLDDKQICNFKNTICCILHQEKVESEDLVIATFKMLTSAARYQASFLTA
VIALGENPISESCNGDNQPVNNDALQCNAANVFDSIWIYVKRSDDLVMIESRIMCNVLYL
LKALWQGAAQYTNLLKQLRNSDFWKKLLNSVVLSIGKNSCQSESATELELQNLAYRYQCQ
HNVLDVVAYEMFQQKKILHSELVTKESSKSLHNESDGSKVATAESSCNLKDIFGGWCGSS
LDAETIKTFVSFEYDDSVKLRARVAAGLFAVRVMCKLKDGDTGSLSVSLVDKVTNLLQKL
RKLPAFSELMAIYAERGYSGGNELDDLILNDLFYHLQGELEGRQISHIPFKELSQYLLQS
NFLQTYHHKHDEDIFPQTDGVCLYDTDRLQGDMAVDLWDLSDWKPSKAVAEMLLLSLQNV
NVMVSLTRSKLSALIALTTALSISDNDNSLDNGARSGRKIPEKSLSSSIDNICQSLHRTI
ELLPPVSDASEDVVEILAAQAELLFRFTRSLSTHLSLSTCLLILKTSGYGLKVLSNCRPL
VTGVISSMKIFLMLILFSLKSTWRDACLGVRTEIEHNEALPEAANVNLGLLPVICNCIEL
TEHCSISMIIIDQILKGFSTPATWFPIIQKHLPMQHIVLKLQDKNSYSNIDIILKFLLTI
AHVKEGAEMLLNAGFFASLRVLLADLSDGRPLSVVERERNLENTFENNERAQPIWGLSLA
VVTAIINSLGESSIFNVEHVVTYFLLEKADLISYYLSPPDFPSDDHDKKRLRAFKPHPSL
SALRESENTVMLICVLAKHRNAWSRAMKEMESQLRERCIHLLAFISCGTPCHGEPPGREP
PIFCHPTLREEYEWHKKPSSINSKNGWFALSALCCGLNPKYSSFSSRTAIVIKAQPNEHA
NLTSQTHFSDAMSIQIYRITCLLLKFLCQQAEDAAERAEEVGFVDLGHFPELPMPDILHC
LQDQGISIVTELCEANKLKQVTSEIQGVCVLLLQITVMALYLEFCVIQICGMRPVHGRVE
DFSREFHSLTKATEGYAFLKESMSSVKQMVSFVYTELLQAEDAL
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atgggagagttgactgttgatggttcgctttggtgggaacccttcacgcatttggtcgct
gaactcgaatctgtttctctctcctccggccttcctcccactctggagaagaagataaag
gacaaccatgcctggtttttggacacaatttcactatttaagccaccaaaccagaaatca
agggaggctttagatgcgacccgactaaagattggtctacaccagattactgtagagact
gataaaaaagaagcagccttgaaaattagttctgctttgtgtttagatgaggtgcagtca
tatattcttgttcatagaacgattattcaaaatagtattgtttctgatggtgtgtttcgc
gagcttcctcatttggttatgctccagtattatttggaacggcaatgtctattgaagtgc
acgcgtcagataattatgcaagctttatatatcgcgccaagatctcaagatgcgtctatt
gtagatgaggcacagagattgatttctgatggactagacaggaaattgttttctgtcctg
caggagaatctatcatccaacttccctaagaacatggatgtggacctttatactttgtgg
gctgaggaaatagtaactgaagacaatcttatattggatgttcttttcctcatattttac
gagttctgcccctgcactggtgaactgtggaaaaaattctgctcgctttatgagggattc
gtttcaaattcttataattttgggaagttggctgtatcagctgaagcggtttcctctatt
tatcatgccaaactgcagctgctgcttatactcatagaaactttggatttggaaaatctt
ttgcagatggttcatgatgaaattcctttcaggcagggctatgttactttttcattgtcg
gaggtgcaagaaattgatgctattgtgtccgcttttgatgtttttgaaaataaagaatca
ggaccgttgattttggcatgggcagtgtttctctgcctaatctcatctcttccagaaaaa
gaagaaaacaatatactgatggagattgatcatattggttatgttcgtcaagcttttgaa
gctggatctttgagttcttttcttgaaattattgaaaatgatagactgaaggattttgat
tattttcagggtcctattgctggttttagaagcgttttgcggacatttttatcagcattt
attgcatcttatgagatcaatctccagttgggggatggtaacctgaaattgatcttggat
attctttgcaacatttatcaaggagaggagtccctatgtactcagttttgggatagggaa
agttttgttgatggtcctatcaggtgtcttctttgcaacttggagggtgaattcccattt
agaagtgctgaacttttacagttgttgtcttcactttgtgaaggagcgtggcctgcggaa
tgtgtatttaactttctcgacaagtccaccggattgtcatctccggttgacatcagtagc
tgttccgtagtggacgatgcttctcagactgttatggcggcccaaccgttacaccttccc
ggtattgagggtctggtcattcctagtggaacccgtggtcatctgttaaaaatgattgat
aggaatattgctctagttagatgggagttctcgcaatctggggttttcatgctgcttttg
catttggcccaagggctatacttggagaaaaccaatgaaatcgtgatgactcttgggttg
ctgagccgacttgtgactttcaatatgggtgtttgttctgctcttctggaccttcgtggc
tatatgcatgatgaaatgaactcaccaatggaacacctgcgtgttaatgtggctgaaatc
atttgttcttggatcaagagtctttctcctaactgctctggtgtggcattgatgtcaacg
ggagttaacattttggcaaagatgttaaaatgctcaccgtatcatgtttctagattgata
gtccaggcaaatatctttgatgtcgcttttaaaacgaatcccttcaaaatcggctccagt
ggcttgtcgagtggatcgtggttgctttctgggcggctcgcaaaaatgctttggatcgac
tgtgagcagaatgattgtcaattgactctttcagtgctagacctcaccatgcagcttatg
gattctggaatggaaaatgatgttgtccttggacttgtaattttctccattcagtatgtc
cttgttaatcatgaattctggaattataaaatcaagcatgctcgctggaaggtgacggtg
aaggtgcttgaagtcttgaagaaatgcattctgtcaatttcatatatccagaaacttggt
gaagtggtgagggatatattacttggtgattcttcaatccacaatgcactctttcgactt
gtttgtaccacttcagatggcctggagaagctctattttagccggctttatgggctaaca
gaaatcgaaggattacaacaagctattatcttggtattggatattctttccagtatgctt
tctgatctctcaagggatgtgcccagtttcactctcttttatcaggcaatcatgtcacca
acaacaaaaccagtgccgctggttactgctgcgatatcactgatgtcattcttccgaaat
cctaagatacaggtgggtgctgcaagactgctctctaggttgtttattattggagacggc
ttgcagtcatatgcgcttagcaatgcatatttcggtctggatgacaagcagatctgtaat
tttaaaaataccatttgttgcattcttcatcaagagaaagtagaaagtgaggatctcgta
attgctactttcaagatgcttacttctgctgcacgctatcaggcttcttttcttactgct
gtgatcgctttgggagaaaatccaatttctgaatcatgcaatggtgacaatcaaccagtc
aacaacgatgcactacagtgcaatgctgctaacgtatttgattccatatggatttatgtt
aaaagatctgatgatctcgtgatgatcgaatcgcgtataatgtgtaatgtgctatatctc
ctaaaagcattatggcaaggagctgctcagtatacaaatctcctgaagcaactgagaaat
tcagacttctggaaaaagctattgaattctgtcgtgctttctataggtaagaatagttgt
caatctgaaagcgcgacagaattggagctccaaaatctggcatacagatatcagtgtcag
cataatgtattggatgtagtggcctatgagatgttccagcagaaaaagattttacattct
gagttggtgacgaaagaatcttccaaatcattacataatgagtcagatggctctaaagta
gcaacagctgaaagttcatgtaacctgaaggatatttttggagggtggtgtgggagctca
ttggatgcggagactatcaagacatttgtttcatttgagtatgatgattctgtaaagctg
cgtgcaagggttgctgctggtttgtttgctgtgcgcgtgatgtgtaaattaaaagacggt
gatacaggaagtttgtctgtttcacttgttgataaagttactaacttgttgcaaaagttg
aggaagttgccagccttttctgagttgatggctatttatgcagagcgtggttacagtgga
ggaaatgaactggacgacttaattctcaatgatttattctatcatctgcaaggagagctt
gaaggcagacagatttctcacataccattcaaggagctgtcacaatatctgctacagtca
aatttcttgcaaacatatcaccataagcacgatgaggacatttttcctcaaactgatggt
gtctgcttatatgacaccgaccgtctgcaaggggacatggcagttgatttgtgggatctt
tccgattggaaaccatctaaagcagttgcagaaatgctgttgctctctttgcagaatgtg
aatgtcatggtgtcactcacaagatccaagctttcagctttaatagctttgacaactgct
ctctccatatctgataatgataattcacttgacaatggggctagaagtggcagaaaaatt
cctgaaaaatcattgtcatctagcattgataatatatgtcagtctctccaccgcacaatc
gagctattacctcctgtttctgatgctagtgaagacgtagtggaaattcttgcagctcaa
gcggagttgcttttccgctttaccaggtctctgagtacgcatttgtctttatccacgtgc
cttctcatattaaaaacttcaggttatggcctcaaggtgttgagtaactgtaggccattg
gttactggtgtcattagttcaatgaagatatttctgatgctaattctcttttcactcaaa
tcaacttggagagatgcttgccttggagtacgaacagaaattgagcataatgaagcctta
cctgaggcagctaatgtgaacttggggctactaccggtgatttgcaactgtatagaactt
actgaacattgctccatctctatgattattattgatcaaatactcaaaggattttcaaca
cctgctacttggttccccatcatccagaaacatctcccgatgcagcatattgttctaaaa
cttcaagataaaaactcctattcaaacattgacataatattgaagtttcttttgactatt
gcacatgtgaaggaaggtgctgaaatgcttctaaatgctggtttctttgcatcgttaaga
gtgttgttggctgacctatctgatggtagacctctctcagtagttgagagggagagaaat
ctggaaaacacctttgagaataatgaaagggctcaacccatttggggacttagcttggct
gtggttaccgcaattattaactctttaggagaaagttcgattttcaatgtggaacatgtg
gtgacttacttcctgttggagaaggctgatctaatttcatattatcttagtcctccggat
tttccatcagatgatcatgataagaaaagacttcgggcattcaaaccacatccttcattg
agtgctcttagagagagtgaaaatacggttatgttaatctgtgttctggcgaagcatagg
aatgcttggtcaagggccatgaaagaaatggagtcacagttaagggaaagatgcatccat
ttattggcctttattagctgcggtacgccatgtcatggggaaccaccaggaagagaaccc
cccatcttttgtcatcctaccctccgagaagagtacgagtggcacaaaaagccatcatct
atcaatagcaaaaatggctggtttgctttatctgcgctttgctgcggtctaaatcccaaa
tattcatctttttcgtctagaactgcaattgtgatcaaagctcaaccaaatgagcatgct
aatctgacttcgcagacacatttttcagatgctatgtctattcagatatacagaattacc
tgtcttcttctaaagtttttgtgtcaacaagctgaagatgctgctgaaagggctgaagaa
gtgggttttgtcgatcttggacattttccggagctaccgatgcctgatatccttcactgc
ttgcaggatcaaggaatatccattgtcactgaattatgcgaagccaacaagttgaagcag
gttacttctgaaatacaaggggtgtgtgttttactgttgcaaataacagtaatggcattg
tacctggagttttgtgtgatccaaatctgtggaatgagacctgtccatggacgtgttgag
gacttctccagggaatttcattcactgactaaagctacggaaggatatgcatttttgaaa
gaatctatgagctccgtaaagcaaatggtgtctttcgtgtatactgaattattgcaggca
gaagacgcactatga
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