Lycium barbarum (goji berry): 132606178
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Entry
132606178 CDS
T09483
Name
(RefSeq) B-type cell cycle switch protein ccs52B
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132606178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132606178
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
132606178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML
WD40_Gbeta
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_Aladin
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_RIG_1st
Beta-prop_HPS5
MIOS_WD40
NBCH_WD40
Aldo_ket_red
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
132606178
NCBI-ProteinID:
XP_060175537
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All DBs
Position
8:complement(69792460..69795511)
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AA seq
502 aa
AA seq
DB search
MESTTQRRKSGINLPSTMSETSLRLDAFSSPPSTKLQSRTITNLGSPMSNRSPRTISNLS
SSPSSKSSATCSDRFIPCRSSSRLHTFGLVEKASPVKEGSGGNNDAYSRLLKSELFGADF
GCFSSPAGTKGSPMSPSKNMLRFKTENSGPNSPYSPSVLGHDSSLSNEVSTPPKPPRKVP
KTPHKVLDAPALQDDFYLNLVDWSSQNVLAVGLGTCVYLWTASNSRVTKLCDLGPTDSVC
SVQWTREGSYISIGTSLGQVQVWDGSQCKKVRTFGGHQTRTGVLAWSSRILSSGSRDRNI
LQHDVRVPSDFVSKFVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNQRSQQPVLKLMEH
TAAVKAIAWSPHQCGLLASGGGTADRCIRFWNTTNGNQLNHVDTGSQVCNLAWSRNVNEI
VSTHGYSQNQIMVWKYPSMSKVATLTGHSLRVLYLAMSPDGQTIVTGAGDETLRFWNVFP
SVKTPAAVKDTGLWSLGRTHIR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaacaacacaaagaagaaagagtggaattaaccttccatctacaatgtctgaa
acctctcttcgtcttgacgccttttcatctcctcccagcacaaagcttcaatcaagaaca
ataaccaacttgggttccccaatgtccaacagatcacctaggactatatcgaacctgtca
tcatcaccatcatctaaatcatctgcaacttgcagtgacaggttcattccttgtagatct
tcgtcgaggctacacacatttgggctggtggagaaggcgtctccggtgaaggagggatca
ggaggaaacaacgatgcttattccaggttgttgaaatctgagctttttggggctgatttt
ggttgtttttcttctcctgcaggtactaaaggctctcccatgagtcctagcaagaatatg
ctgaggttcaagactgagaattcagggcctaattctccttattcgccttcggttttgggg
catgacagttccctctctaatgaggtttctacccctcctaaaccacctaggaaagtgccc
aagacaccccacaaggttctggatgcaccagcacttcaagatgacttctatttgaaccta
gttgattggtcctctcagaatgtcctcgctgttgggttaggaacttgtgtttatttatgg
acagcctcaaatagtagagtgacaaagttgtgcgacttaggacccactgatagcgtctgt
tcggtccaatggacccgtgaggggtcttatatatcaattggtacaagtcttggccaagtt
caggtttgggatggaagtcaatgcaaaaaggttagaacatttggtggacatcagacaaga
actggagtcctcgcgtggagttctcgcatcctatcttctggtagcagagacagaaacatc
cttcagcatgacgttcgcgttccaagtgactttgtcagcaaatttgttggtcacaagtcc
gaggtatgtgggttgaaatggtctcatgatgatagagagcttgcgtcagggggaaatgac
aatcagctcttagtgtggaatcagagatctcagcaaccagttttgaagctaatggagcat
actgccgctgtgaaggccattgcctggtctcctcaccaatgtggccttcttgcatcaggg
ggaggaactgctgatcgatgcattcgcttttggaacacaaccaatggcaatcagttgaac
catgttgatacaggaagccaggtatgcaatctagcctggagtagaaatgtgaatgagata
gttagcacacatggctattcccaaaaccaaatcatggtgtggaagtatccttcaatgtca
aaagttgccactctaactggccatagcctgcgcgtcctatatcttgccatgtcacctgat
ggccagacaatagtaactggagcaggagacgagacattgcgcttttggaatgtatttccc
tctgtaaaaactcctgcagcagtgaaggacacaggactttggtctttaggcagaacgcac
atacggtga
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