Lycium barbarum (goji berry): 132606230
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Entry
132606230 CDS
T09483
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00750
Vitamin B6 metabolism
lbb01100
Metabolic pathways
lbb01240
Biosynthesis of cofactors
Module
lbb_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
132606230
Enzymes [BR:
lbb01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
132606230
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
His_biosynth
NMO
Motif
Other DBs
NCBI-GeneID:
132606230
NCBI-ProteinID:
XP_060175619
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Position
1:167569649..167570945
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AA seq
309 aa
AA seq
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MAGSGVVTVYGNGALTETTKQSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM
ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE
SEVLTLADDENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRH
VRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAL
MMQLGCDGVFVGSGIFKSGDPAKRGRAIVQAVTHYSDPQLLAEISCGLGEAMVGINLDDK
VERYANRSE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggccggaagcggtgtggtaacagtttacggtaacggtgctctaacggagaccaccaaa
caatcccctttctccgttaaagtgggtcttgctcagatgcttcgcggcggcgttatcatg
gacgtcgttaatgctgaacaagcccgtatagcggaagaagccggcgcgtgtgctgtcatg
gctcttgagcgcgtccctgctgatatacgcgctcaaggtggtgtagcccgtatgtcggat
ccacaacttatcaaagaaatcaaacaggccgttaccatccccgttatggctaaagcccgt
attggtcatttcgttgaggcccaaatccttgaggcaattggaattgattacgtggatgaa
tcagaagtgttaacccttgctgatgatgagaatcacattaacaaacataatttccgtatc
ccgtttgtttgtgggtgtcgtaacctaggtgaggctctacgtcgtatccgtgagggcgca
gctatgatacgtacaaaaggtgaagcgggtacaggcaacatcattgaagccgttcgtcat
gtccgttccgttatgggtgatattcgtgtgctacgcaacatggacgatgatgaggtgttc
actttcgctaagaagatagcagcaccgtacgatctggtgatgcagacaaaacagttgggt
aggcttcctgttgttcattttgctgcaggtggggttgcaacaccagcagatgcagcgctt
atgatgcagttgggatgtgatggtgtatttgtcgggtcgggtattttcaagagtggtgac
ccggctaagaggggccgggctattgttcaagccgtgactcattacagtgacccacaattg
ttggctgagattagctgtgggcttggtgaggctatggttgggattaaccttgatgataaa
gtggagaggtatgctaaccgttctgagtga
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