KEGG   Lycium barbarum (goji berry): 132606335
Entry
132606335         CDS       T09483                                 
Name
(RefSeq) ras-related protein Rab5
  KO
K07887  Ras-related protein Rab-5A
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb04144  Endocytosis
lbb04145  Phagosome
lbb04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    132606335
   04145 Phagosome
    132606335
   04148 Efferocytosis
    132606335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lbb04131]
    132606335
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lbb04147]
    132606335
   04031 GTP-binding proteins [BR:lbb04031]
    132606335
Membrane trafficking [BR:lbb04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    132606335
 Endosome - Lysosome transport
    132606335
Exosome [BR:lbb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   132606335
  Exosomal proteins of other body fluids (saliva and urine)
   132606335
  Exosomal proteins of colorectal cancer cells
   132606335
  Exosomal proteins of bladder cancer cells
   132606335
GTP-binding proteins [BR:lbb04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    132606335
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase ATPase AAA_24 TsaE AAA_16
Other DBs
NCBI-GeneID: 132606335
NCBI-ProteinID: XP_060175775
LinkDB
Position
8:complement(94914599..94921596)
AA seq 200 aa
MASSGHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSINNDTVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTDSFARAKKWVQELQKQGNPNMVVAL
AGNKADLEDKRKVTAEEARLYAEENGLFFMETSAKTAVNVNDVFYEIAKRLPRAQPAQSP
AGMVLTDKPAEGSQAASCCT
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcgtcaagcggtcacaataatctcaacgcaaaactcgtgttgttaggggacatggga
gctggtaaatcaagcttggttatacgattcgtcaagggtcaattccttgaattccaagaa
tcgacgatcggagcggctttcttttcatctacggtgtcaattaacaatgataccgtgaag
tttgagatctgggatactgctggtcaggagaggtaccatagcttagcacctatgtactac
agaggtgctgcagcagctattatcgtctatgacatcaccagcactgattcgtttgcacgg
gcaaagaaatgggtgcaagaattgcagaagcaaggtaatcccaacatggtcgtggctctt
gctggcaacaaggctgatctagaagataagaggaaggtgactgcagaagaagcacgcttg
tacgcagaggaaaacggtctatttttcatggagacctctgccaaaactgctgttaatgtc
aatgatgtattctacgaaattgctaaacgcttgcctagagctcaacctgctcaaagtccg
gcaggaatggtacttacggacaagccagcagaaggatcacaagctgcatcatgctgcact
taa

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