Lycium barbarum (goji berry): 132606335
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Entry
132606335 CDS
T09483
Name
(RefSeq) ras-related protein Rab5
KO
K07887
Ras-related protein Rab-5A
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04144
Endocytosis
lbb04145
Phagosome
lbb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132606335
04145 Phagosome
132606335
04148 Efferocytosis
132606335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132606335
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbb04147
]
132606335
04031 GTP-binding proteins [BR:
lbb04031
]
132606335
Membrane trafficking [BR:
lbb04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
132606335
Endosome - Lysosome transport
132606335
Exosome [BR:
lbb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132606335
Exosomal proteins of other body fluids (saliva and urine)
132606335
Exosomal proteins of colorectal cancer cells
132606335
Exosomal proteins of bladder cancer cells
132606335
GTP-binding proteins [BR:
lbb04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
132606335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
ATPase
AAA_24
TsaE
AAA_16
Motif
Other DBs
NCBI-GeneID:
132606335
NCBI-ProteinID:
XP_060175775
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All DBs
Position
8:complement(94914599..94921596)
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AA seq
200 aa
AA seq
DB search
MASSGHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSINNDTVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTDSFARAKKWVQELQKQGNPNMVVAL
AGNKADLEDKRKVTAEEARLYAEENGLFFMETSAKTAVNVNDVFYEIAKRLPRAQPAQSP
AGMVLTDKPAEGSQAASCCT
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaagcggtcacaataatctcaacgcaaaactcgtgttgttaggggacatggga
gctggtaaatcaagcttggttatacgattcgtcaagggtcaattccttgaattccaagaa
tcgacgatcggagcggctttcttttcatctacggtgtcaattaacaatgataccgtgaag
tttgagatctgggatactgctggtcaggagaggtaccatagcttagcacctatgtactac
agaggtgctgcagcagctattatcgtctatgacatcaccagcactgattcgtttgcacgg
gcaaagaaatgggtgcaagaattgcagaagcaaggtaatcccaacatggtcgtggctctt
gctggcaacaaggctgatctagaagataagaggaaggtgactgcagaagaagcacgcttg
tacgcagaggaaaacggtctatttttcatggagacctctgccaaaactgctgttaatgtc
aatgatgtattctacgaaattgctaaacgcttgcctagagctcaacctgctcaaagtccg
gcaggaatggtacttacggacaagccagcagaaggatcacaagctgcatcatgctgcact
taa
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