Lycium barbarum (goji berry): 132606407
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Entry
132606407 CDS
T09483
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132606407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132606407
03036 Chromosome and associated proteins [BR:
lbb03036
]
132606407
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132606407
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132606407
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
EIF3I
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
132606407
NCBI-ProteinID:
XP_060175875
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Position
8:complement(99016624..99034395)
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AA seq
348 aa
AA seq
DB search
MSIFGGATAANTNPNKSTEVQQPPADSVSSLCFSPKANLLVASSWDNQVRCWEVMGSGTN
IGTVPKAAISHEQPVLCSAWKDDGTTVFSGGCDKQVKMWPLSGSQPVTVGMHDLPIKDLA
WIPEMSLLVTGSWDKTLRYWDLRQPNPAHVQQLPDRCYALTVKHPLMVAGTADRNVIVFN
LQNPQTEFKRILSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCHR
EGNEIYSVNSLNFHPTHGTFATAGSDGSFNFWDKDSKQRLKAMSRCSQPIPCSAFNHDGS
IYAYAVCYDWSKGAENHNPSTAKTNIFLHFPQESEVKGKPRIGTSGRK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatatttggtggcgctactgctgcgaatacaaatcctaacaagtctactgaggtt
caacaacctcctgctgattctgtatcaagcctctgcttcagtccgaaggctaatcttctg
gttgctagttcatgggataaccaggtacgatgttgggaagtaatgggaagtggaaccaac
attggaactgtacccaaggccgctatatcacatgaacaaccggttttgtgctcagcttgg
aaggatgatgggacaactgtcttctctggaggttgtgacaagcaagtgaaaatgtggccg
ttatctggtagtcaacctgtaacagtaggcatgcatgaccttcccatcaaggacttggct
tggatcccagagatgagtctcttggtcacaggaagctgggataagactctgaggtattgg
gatttgagacagccaaatcccgcacatgtccaacaacttcctgaccgctgctatgcactt
acagtgaaacatcctctgatggttgctggcacagctgatagaaatgttatagtattcaat
ttgcagaatcctcagactgagttcaagagaatactctcacccttaaagtatcaaactcgg
tgtttagctgccttccctgatcaacaagggttcctggttggctctattgaaggacgggtt
ggtgtgcaccatcttgatgattcgcaacaaagtaaaaacttcacattcaaatgccacagg
gagggcaacgaaatttactcagtcaactctctgaatttccatcctacacatggaacattt
gcaactgccggatctgatggttccttcaacttttgggacaaagatagcaaacagaggctt
aaggcaatgtcaagatgcagccagccgataccttgcagcgcgttcaaccatgatggctca
atctatgcatatgcggtttgttatgattggagcaagggtgcagaaaatcataatccatca
actgcaaaaacaaacattttcttgcacttcccacaggagtctgaggttaaaggcaagcca
agaattggaactagcggtagaaagtga
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