Lycium barbarum (goji berry): 132606865
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Entry
132606865 CDS
T09483
Name
(RefSeq) THO complex subunit 4A-like
KO
K12881
THO complex subunit 4
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03013
Nucleocytoplasmic transport
lbb03015
mRNA surveillance pathway
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132606865
09122 Translation
03013 Nucleocytoplasmic transport
132606865
03015 mRNA surveillance pathway
132606865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132606865
03041 Spliceosome [BR:
lbb03041
]
132606865
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132606865
TREX complex
132606865
Spliceosome [BR:
lbb03041
]
Complex C
Other components
EJC/TREX
132606865
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132606865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_5
RRM_3
Serglycin
Motif
Other DBs
NCBI-GeneID:
132606865
NCBI-ProteinID:
XP_060176516
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All DBs
Position
8:complement(117228348..117236345)
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AA seq
255 aa
AA seq
DB search
MSNLDVSLDDLIKRNKSSSSSSRNPRPRTSGSGPGSGSGSGSGPGPRRRFPNRAANRPAP
YSSGPVQAPESAWDHDMFAEHAPSYPAVRGAGISGIETGIKLLISNLDYGVSNEDIKELF
SEAGDIKRYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKRYNNVQLDGKPMKIEFAGTNIA
PPALPPIRNRLYGNPNPAPRSQQRGGGFRRPRGGRGGGMRKDGGRGRGRGENVSAEDLDA
ELEKYHAEAEAMQTN
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatctggatgtatcccttgacgatttaatcaaaaggaacaaaagtagttccagc
agtagtcgaaaccctagaccaagaacatccggatctggacccggatccggatccggatcc
gggtcaggacccggtccacgccgtcgcttccctaaccgtgccgccaaccgacccgcacca
tattcatccggaccggttcaagcaccagagtctgcgtgggaccacgacatgtttgccgag
catgccccgtcgtatccagctgtccgtggggccgggatatcggggattgagaccggtatc
aagctcctcatttccaacttggattatggggtttcaaatgaagacatcaaggagcttttc
tcagaagctggtgatataaagcgttactcaattcattatgacaagagtggaagatcaaag
ggaactgcggaagtaatcttttcacgtcgaagggatgctgaggcagctatcaagagatac
aacaatgttcagctagacgggaagcccatgaaaattgagtttgctggaacaaatattgct
cctccagctctacctccaattagaaatcgtttatatggaaatccaaatcctgctccaaga
agtcaacaaagaggtggtggatttagacgtcctcggggtggtagaggagggggcatgaga
aaagatggtggaagaggcagaggtcgtggtgagaacgtttccgcagaagatcttgatgct
gaattggagaagtaccatgcagaagcagaagcaatgcagacgaactga
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