KEGG   Lycium barbarum (goji berry): 132606865
Entry
132606865         CDS       T09483                                 
Name
(RefSeq) THO complex subunit 4A-like
  KO
K12881  THO complex subunit 4
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03013  Nucleocytoplasmic transport
lbb03015  mRNA surveillance pathway
lbb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132606865
  09122 Translation
   03013 Nucleocytoplasmic transport
    132606865
   03015 mRNA surveillance pathway
    132606865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbb03019]
    132606865
   03041 Spliceosome [BR:lbb03041]
    132606865
Messenger RNA biogenesis [BR:lbb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     132606865
    TREX complex
     132606865
Spliceosome [BR:lbb03041]
 Complex C
  Other components
   EJC/TREX
    132606865
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    132606865
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_5 RRM_3 Serglycin
Other DBs
NCBI-GeneID: 132606865
NCBI-ProteinID: XP_060176516
LinkDB
Position
8:complement(117228348..117236345)
AA seq 255 aa
MSNLDVSLDDLIKRNKSSSSSSRNPRPRTSGSGPGSGSGSGSGPGPRRRFPNRAANRPAP
YSSGPVQAPESAWDHDMFAEHAPSYPAVRGAGISGIETGIKLLISNLDYGVSNEDIKELF
SEAGDIKRYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKRYNNVQLDGKPMKIEFAGTNIA
PPALPPIRNRLYGNPNPAPRSQQRGGGFRRPRGGRGGGMRKDGGRGRGRGENVSAEDLDA
ELEKYHAEAEAMQTN
NT seq 768 nt   +upstreamnt  +downstreamnt
atgtcaaatctggatgtatcccttgacgatttaatcaaaaggaacaaaagtagttccagc
agtagtcgaaaccctagaccaagaacatccggatctggacccggatccggatccggatcc
gggtcaggacccggtccacgccgtcgcttccctaaccgtgccgccaaccgacccgcacca
tattcatccggaccggttcaagcaccagagtctgcgtgggaccacgacatgtttgccgag
catgccccgtcgtatccagctgtccgtggggccgggatatcggggattgagaccggtatc
aagctcctcatttccaacttggattatggggtttcaaatgaagacatcaaggagcttttc
tcagaagctggtgatataaagcgttactcaattcattatgacaagagtggaagatcaaag
ggaactgcggaagtaatcttttcacgtcgaagggatgctgaggcagctatcaagagatac
aacaatgttcagctagacgggaagcccatgaaaattgagtttgctggaacaaatattgct
cctccagctctacctccaattagaaatcgtttatatggaaatccaaatcctgctccaaga
agtcaacaaagaggtggtggatttagacgtcctcggggtggtagaggagggggcatgaga
aaagatggtggaagaggcagaggtcgtggtgagaacgtttccgcagaagatcttgatgct
gaattggagaagtaccatgcagaagcagaagcaatgcagacgaactga

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