Lycium barbarum (goji berry): 132606967
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Entry
132606967 CDS
T09483
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP-like
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04120
Ubiquitin mediated proteolysis
lbb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132606967
04120 Ubiquitin mediated proteolysis
132606967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lbb03110
]
132606967
04131 Membrane trafficking [BR:
lbb04131
]
132606967
04121 Ubiquitin system [BR:
lbb04121
]
132606967
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132606967
Chaperones and folding catalysts [BR:
lbb03110
]
Other chaperones and cochaperones
Others
132606967
Membrane trafficking [BR:
lbb04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132606967
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
U-box type E3
132606967
Multi subunit type E3
STUB1-CHIC2 complex
132606967
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_11
TPR_17
TPR_8
TPR_14
ANAPC3
TPR_16
CFAP70_mid_TPR
zf-NOSIP
TPR_BSK1_C
TPR_9
DUF5327
CFAP70_TPR_C
zf-Nse
BRO1
Motif
Other DBs
NCBI-GeneID:
132606967
NCBI-ProteinID:
XP_060176679
LinkDB
All DBs
Position
1:168923261..168928653
Genome browser
AA seq
277 aa
AA seq
DB search
MAPIVGSKQAEQLKQDGNTYFLKNRFGAAIDAYTEAITLCPNVPIYWTNRALCHRKRDDW
KRVEEDCRKAIQLDHNSVKAHYYLGLALRQKEQYAEGVRELVKALDLGRGADPGSYIVEE
IWEELAKAKYMEWEHESTRRSWELQNLKESCELALKEKHVRDSSQTEGLKDESSTSLSKQ
LEAVGEVFMKAAEDDTPSEVPDYMCCQITLDIFRDPVIAPSGFTYERAVILDHLRKVGEF
DPITREPLYPSQLVPNLAIKEAVRAFLERHAWAYRIE
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaattgtgggttcaaagcaagcggaacaactgaaacaagatgggaatacttat
tttttaaagaatcggtttggggctgcaatagatgcttatactgaggcaattacattgtgc
cctaatgttccgatttattggacaaatcgagctttgtgccatcgcaaacgggatgactgg
aaaagagtggaggaagattgtagaaaggctattcagctggatcataattctgtaaaggcc
cactactatcttggtcttgcattgcgacaaaaggaacagtatgctgaaggtgtgagagaa
ttggtaaaggcattagaccttggaagaggtgcggatccaggaagctacattgttgaagag
atttgggaagagcttgcgaaagcaaaatacatggagtgggagcatgaatctacgaggcgc
tcctgggagcttcagaacttgaaagaatcctgtgagttggctctcaaggagaagcatgtg
cgtgatagttctcagacagaagggctcaaagatgaaagctcaacatctctttcgaagcaa
ctggaagctgtaggcgaggttttcatgaaagctgcagaagatgatactccaagtgaggtt
cctgattacatgtgttgtcaaatcactcttgatatttttcgcgaccctgtcattgctccc
agcgggtttacatacgagcgggctgttatccttgaccatttgcggaaggtgggcgaattt
gatccaattacgcgagaaccactttatccgtcccagttggtgccaaatctggctataaaa
gaagctgttcgggcatttctggaaaggcatgcctgggcatacagaatagagtaa
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