Lycium barbarum (goji berry): 132606993
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Entry
132606993 CDS
T09483
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00531
Glycosaminoglycan degradation
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
132606993
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lbb00536
]
132606993
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
132606993
Glycosaminoglycan binding proteins [BR:
lbb00536
]
Heparan sulfate / Heparin
Enzymes
132606993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motilin_assoc
Motif
Other DBs
NCBI-GeneID:
132606993
NCBI-ProteinID:
XP_060176761
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All DBs
Position
8:complement(120964689..120968606)
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AA seq
540 aa
AA seq
DB search
MASLFSCFLGLCFLLLLLYFSQISRAEESSKSIILEEGTLYIDGWAAIAKTDEDFICATL
DWWPCNKCDYGTCSWGNASLLNLDLSNKVLLNAIRAFTPLKIRLGGTLQDKITYQMAHYE
QPCTPFLRNNTEMFGFTQGCLPLSRWDELNEFFEKTGAKVTFGLNALNGRTIGPDGSALE
DWDSSNAESFLRYTVSRGYSIHGWELGNELNGNGIGAAISADQYSRDVIALHKLLQDIYK
GKDVIPLILAPGGIFDAVWFAKFIDKASNSLQVVTHHIYNVGAGNDSNLVQKILDPSHLD
EESNIFRNLQGILRSYGTSAVAWVGESGGVFNSGHNLVSNSFVSSFWFLDQLGMSATFDT
KTYCRQTLVGGNYGLLNTTTFHPNPDYYGALLWHRLMGRNVLSTHFRGTKKLRTYAHCSQ
SSDGITLLLINMHGGTTVNVGLSVRNKAPMLLQIINDQNPRHGIQREEYHLTAKDGELHS
QTVILNGKELNVDHFGRIPLLEPIRPNPSDPISIAPLSIVFVHIPTIQVPACSMFTRDNM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgttcagctgcttcttggggttgtgcttcttgctgttattgttgtacttc
agccaaatttcaagagcagaagagtcttcaaagagtataattcttgaagaagggacactt
tacattgatgggtgggcagccattgcaaagactgatgaggacttcatttgtgccacctta
gattggtggccttgtaataaatgtgactatggtacttgtagctggggaaatgcttctctc
cttaatcttgatctaagcaacaaggtattgttgaatgcaatcagagcatttactccatta
aaaattagacttggaggcacattgcaggacaaaataacataccaaatggcgcattatgag
caaccatgtactccttttctccgtaataatacagagatgtttggcttcactcaaggttgc
ttacctttgtctcgttgggatgaactcaacgaattcttcgagaaaacgggggcaaaagta
acttttggattgaatgctttaaatggaaggacaataggtcctgatggctctgctttggaa
gattgggattccagcaatgcagagtctttcctcagatatacagttagcagaggttattct
atccacggctgggagcttggaaatgaattgaatggcaacggaattggtgcagctatttca
gcggatcaatacagccgtgatgttatcgctcttcacaaattattacaagatatatataaa
gggaaggatgtaataccattaatccttgcaccaggaggaatatttgatgctgtttggttt
gcaaaattcatagataaagcatccaattctcttcaagtagttacacatcacatttacaat
gttggtgcaggcaatgacagcaacctagttcagaaaatacttgatccttctcatctggat
gaagaatccaacatattccgaaatcttcaaggcattctccgaagttatggaacctcagca
gtagcatgggttggtgaaagtggaggggtttttaacagcggtcacaatcttgtttccaat
agcttcgtgtccagcttttggttcttggatcagcttgggatgtcagccacgttcgacact
aagacatattgtcgacaaacattggttggtggaaactacggtctcctcaataccacaacg
tttcatccaaatcctgattattatggtgctcttctttggcatcgtttgatgggaaggaat
gttctatcgacacacttccgaggaacaaaaaagctacgaacttatgcccactgttcacaa
tcttctgacggaatcacactgttgttgatcaacatgcacggtggtacaacagttaatgtt
ggtctatcggtcagaaacaaggcgccaatgctgctgcaaatcataaacgatcagaatccg
agacacggaattcagagggaagaatatcaccttacagccaaagatggtgaattacatagc
caaacagtgattttgaatggaaaggaacttaatgtagatcattttggaagaatccctctc
ttggaacctatacgaccgaatccctccgacccaatttccattgctcctttgtcaattgta
tttgttcacatcccaactattcaagtgcctgcttgcagtatgtttaccagagacaacatg
taa
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