Lycium barbarum (goji berry): 132607067
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Entry
132607067 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132607067
KO
K18735
protein SMG9
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132607067
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
132607067
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
ABC_tran
AAA_18
RsgA_GTPase
AAA_16
MeaB
DO-GTPase2
GntP_permease
AAA_30
Motif
Other DBs
NCBI-GeneID:
132607067
NCBI-ProteinID:
XP_060176846
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Position
8:122662205..122666136
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AA seq
404 aa
AA seq
DB search
MAGSGGNPSSNQSSVSHQAPKILLAKPGLVSAGKFNRGGPGDDSAVHRPRLPAVGSLNLL
SETWDFHTDRFLPFLTDNTDFTVVGVIGPPGVGKSTIMNEIYGFDASSPGILPPFAIETE
ETRDMAKHCTIGIEPRVSSERIILLDTQPVFSPSVLAEMIRPDGSSTIPIITGESLSAEL
GHELMSIQLGVLLASICHFILVVSEGVNDASMWQLMTTVDLLKHGIPDPSSLTLSHPQSS
EKENRDKILDSGEEYMADPVFVHTKLRTEDLAPSNLVQLKKALTQFFCSSSFVTSENHNT
GKESQVSAVPLNIHSADRESEFLKLFLIPSRNKDDSLKPQYESHISALWNLRDQVLSMRG
PSFSRTVSERDWLKNSAKIWEIIRNSPIIVDYCRTLQSSGMFRR
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcagtggtggaaaccctagttccaatcagtcatctgtgtctcatcaagctccc
aaaatcctattagccaaacctggacttgttagcgccggtaagttcaaccgtggtggccct
ggcgatgattctgcagttcaccgcccacgtcttcctgccgttggatctcttaatcttctc
tctgagacctgggatttccacactgatcgttttctgccgtttctaacggataatacggac
tttacagtagtgggtgtgattggtcctccaggggttgggaagtcgacgataatgaacgaa
atttatggttttgatgctagctcacctggaattcttcctccttttgctatagaaacagaa
gaaacaagggatatggcgaaacattgtacgattggcattgaaccacgagtttcctctgaa
cggattatactgcttgatactcagcctgtttttagcccttcagttttggctgaaatgatt
agaccagatggctcatccacaatacccataataaccggtgaatcattatcagctgagtta
ggtcatgaactgatgagcatccaacttggtgttcttcttgcatccatttgtcactttata
ttggtggtgtcagagggagtcaatgatgcaagcatgtggcaactcatgacaacggttgat
ttgctaaagcatggtatacctgatccgtcctcgttaaccctttctcatcctcaaagctct
gagaaagaaaacagagacaaaattctagacagtggagaagagtacatggctgatccagtt
tttgtgcatacaaagctacgcactgaagatctagcaccaagtaaccttgttcaactgaag
aaggcactcacacaattcttttgctcgtcatcttttgtgacatcagaaaaccacaacact
ggcaaagagagtcaagtttctgctgttcctcttaacattcatagtgctgatcgagaatct
gaatttttgaaattatttctaataccatctagaaataaagacgattccttgaagccacag
tatgaaagccacatttcagcattatggaatttgcgggatcaggttttgtcaatgagaggt
ccatcattctcaaggactgtgtccgagcgtgattggctgaaaaattctgccaagatatgg
gaaattattaggaattctcccattattgtggactactgcagaactcttcaaagttcaggc
atgtttaggaggtag
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