Lycium barbarum (goji berry): 132607120
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Entry
132607120 CDS
T09483
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132607120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132607120
03009 Ribosome biogenesis [BR:
lbb03009
]
132607120
04131 Membrane trafficking [BR:
lbb04131
]
132607120
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbb04147
]
132607120
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132607120
Ribosome biogenesis [BR:
lbb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
132607120
Membrane trafficking [BR:
lbb04131
]
SNARE
SNARE associated proteins
Others
132607120
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132607120
Exosome [BR:
lbb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132607120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_22
AAA_33
AAA_5
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
Mg_chelatase
AAA_28
AAA_18
ATPase_2
Parvo_NS1
Viral_helicase1
ABC_tran
IstB_IS21
Vps4_C
NACHT
AAA_7
NB-ARC
AAA_lid_PRS2_C
AAA_24
TsaE
DUF815
Zeta_toxin
Zot
Phage_Mu_Gp48
Motif
Other DBs
NCBI-GeneID:
132607120
NCBI-ProteinID:
XP_060176932
LinkDB
All DBs
Position
8:complement(124134570..124141380)
Genome browser
AA seq
807 aa
AA seq
DB search
MTNKAESSDSKGTKRDFSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADETCDVPKIRMNKVVRNNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPSEYCV
VAPDTEIFCEGEPVNREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEEVDLERICKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDIDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEREKRRSEN
PEAMEEDVEDEVPEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSE
TSTAGTTATADPFATSAGAADEDDLYS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgactaacaaagctgaatcatccgattcgaaagggacaaagagggattttagtacggcg
attttggagaggaagaagtcaccgaatcgacttgttgtggatgaggcaactaatgatgac
aactctgttgttgctcttcatcctgatactatggagaagcttcagctttttcgtggtgac
actatcttgatcaagggtaagaagagaaaagatacaatctgcattgcccttgctgatgag
acctgtgacgtgccgaagattaggatgaacaaggttgtccgaaataacctaagggttcga
cttggtgatgttgtctctgtgcatcagtgtcctgatgtcaagtatggaaagcgcgtacac
attcttcccattgatgacaccattgaaggagtcactgggaacctctttgatgcttacttg
aaaccctatttccttgaagcatacagaccagtaagaaagggcgatctttttcttgtaagg
ggaggtatgagaagtgtagagttcaaggttattgagactgatccttctgaatactgtgtt
gttgcccctgataccgagatattttgtgagggcgaaccagtgaatagggaagacgagaat
agactagatgaggtcggttatgatgatgtaggtggtgtgcgtaaacaaatggctcagata
agggagcttgttgagctgccactaaggcacccacaactcttcaaatctatcggtgtcaag
cctcccaaaggaattttgttgtatggaccacctggatcaggaaagacgttaatagccaga
gcagttgcaaatgagacaggcgcgttcttcttctgcattaatggtccagagattatgtca
aaattggcgggagaaagtgaaagcaatctcaggaaagcgtttgaagaagctgagaagaat
gcaccatcaatcattttcattgacgagattgactcaatagctcctaaacgtgagaagaca
aatggagaggtggagaggaggattgtctcccagcttttgacacttatggatggacttaaa
tcacgtgcccatgtaattgtcatgggtgccactaatcgccccaatagcattgaccctgcc
ctaagaaggtttggtagattcgatagggaaatagacattggtgttccagatgaagtgggg
cgactcgaggtgcttcgtatccatacgaagaacatgaagcttgctgaagaggttgattta
gaaagaatttgcaaagatacacatggttatgttggtgctgatttagcagctttgtgtacc
gaagctgcacttcaatgcatcagagagaagatggacgtgatagatctggaggatgagacc
attgatgcagagattctgaactctatggctgtgacaaatgagcacttccaaactgctctt
gggacgagcaatccttctgccttgcgtgaaaccgttgttgaagttcccaatgtttcatgg
gaggacattggaggtcttgagaacgtcaagcgtgagctccaggagactgttcaatatccg
gtggaacatcctgagaaattcgagaagtttggtatgtctccctcaaagggagtccttttc
tatggcccacctggatgtgggaaaactttgctcgcgaaggccattgctaatgaatgccag
gccaacttcataagtatcaagggtccagaactgcttaccatgtggtttggagagagtgaa
gccaacgtaagagaaatatttgacaaggcccgccaatctgctccttgtgtcctattcttt
gatgaactggactcaatcgccacacagagaggaagtagctcgggagacgctgggggagct
gctgatagggttttgaatcaactccttactgaaatggatgggatgaatgctaagaaaact
gtgttcattattggtgcaactaacaggccagacattattgatcctgcacttctgcggccc
ggtcgtcttgaccaattgatttatattcctctccctgacgaagattctcgtcaccaaatt
ttcaaggcatgcttgaggaaatcacctctttctaaggatatcgatctaagagctctagca
aaatatacacagggctttagtggagctgacattacagaaatctgtcaacgtgcttgcaaa
tacgctatcagagaaaatattgagaaagatattgagagggagaagaggagaagtgagaat
cctgaagccatggaggaagacgttgaagatgaggtacccgagatcaagcctgctcatttc
gaggaatcaatgaagtacgctaggaggagtgtcagtgacgctgatatccgcaagtaccag
gcttttgctcagactttgcaacagtccagaggtttcggttcggaattccgattctctgag
acgagcacggcggggaccactgcaactgctgacccatttgctacttcggctggtgcagca
gatgaagatgacctgtatagttag
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integrated database retrieval system
