Lycium barbarum (goji berry): 132607130
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Entry
132607130 CDS
T09483
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132607130
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lbb01009
]
132607130
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132607130
03036 Chromosome and associated proteins [BR:
lbb03036
]
132607130
Protein phosphatases and associated proteins [BR:
lbb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
132607130
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
132607130
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
132607130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
132607130
NCBI-ProteinID:
XP_060176946
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Position
8:124393287..124400892
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AA seq
495 aa
AA seq
DB search
MLNKIIKRGHKKVPKSSSEVSDFTHALGHAPPQGSRNSGNVSTSDVVVNHASRGNLVNNS
IQTNPTVMTSSVPSGNIENLPMFRDVPISERQVLFFKKVNICCFQFDFNDTMKMVREKEI
KRQSLVELVDYVQSGAGKISESNQEEMVKMISLNIFRCLPPASHENTGSENVEHEEDEPC
LEPSWPHLQLVYELLLRYVVSSDTDTKVAKRFIDHSFVLKLLDLFDSEDPREREYLKTIL
HRVYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLF
LVRALIPLHKPKPVAMYHQQLSYCVVQFVEKDYKLADTVIRGLLKYWPVTNCQKEVLFLQ
ELEEVLETTQAAEFQRCMVPLFRQIARCLNSPHFQVAERALFLWNNEHIVGLIAQNRNVI
LPIIFDALQKNIDNHWNPAIHGLTVNVRKLFMDMDADLFDECQGQYSEKAARATELEEQR
ELRWQRLTAAATKGC
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataaaatcataaagagagggcacaaaaaagtgcctaaatcatcatcagaggta
tctgatttcactcacgcgctcggtcacgcgccgccgcaaggaagtagaaattccggcaat
gtttcaacatccgatgttgtcgttaaccatgcttccaggggcaatttggtaaataactcg
atccaaacaaaccctacggtgatgacgtcatcagtgccttctggaaacatcgagaacctt
ccaatgtttcgtgatgttccgatttcggaacgtcaagtgttgttttttaagaaagtaaac
atttgttgttttcagtttgatttcaatgatacaatgaaaatggtaagagaaaaagagatt
aaaagacaatcacttgttgagcttgttgattatgttcaatctggtgctggtaaaataagt
gaaagtaatcaagaagaaatggtaaaaatgatatctttgaatatatttcgatgtttacca
ccagcgtctcacgagaatacagggtcggaaaatgtggaacatgaagaagacgagccttgt
ctcgagccatcgtggcctcatttacagctcgtttatgaattgttgttaaggtatgttgtt
tcatcggatactgatacgaaagtagctaaacggtttattgatcattcgttcgtgttgaag
ttattggatttgtttgattctgaggacccgagggaaagagagtatttgaaaacgatactt
catagggtatatgggaagtttatggtgcatagaccgtttataaggaaggcgattaataac
atcttttataggtttatatatgagactgagaggcatagtgggataggtgagttgttggag
attctagggagtattataaatggtttcgcgttacctatgaaagaggaacataagttgttt
cttgttcgggcactcataccactgcacaagccgaaaccggttgcaatgtatcatcagcag
ttatcctactgtgttgttcagtttgttgaaaaggattacaagttggctgatacggttata
aggggtttgttgaagtactggcctgttactaattgccaaaaagaagtcctttttcttcag
gagcttgaagaagtgttggagactacacaggcggcagaatttcagcgttgcatggttcct
ctttttagacagattgctcgttgccttaacagcccacacttccaggtcgcagaacgagca
ctatttctatggaacaatgagcacatagtgggactgatcgcccagaaccgcaatgtcatt
ttgccaatcatttttgatgctctgcaaaagaacatagataatcattggaatccagctatc
catgggctgaccgtaaatgttcgcaaattgttcatggacatggatgctgatttgttcgat
gagtgccaaggacagtattctgagaaagcagctcgagccactgaactggaagagcagcga
gaattaagatggcagagattaacagctgctgcaacaaaaggatgctaa
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