Lycium barbarum (goji berry): 132607253
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Entry
132607253 CDS
T09483
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00906
Carotenoid biosynthesis
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
Module
lbb_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
132607253
Enzymes [BR:
lbb01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
132607253
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
GDI
HI0933_like
GIDA
Thi4
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
132607253
NCBI-ProteinID:
XP_060177132
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Position
8:127216187..127222907
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AA seq
604 aa
AA seq
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MGTLNFMFPNSLLDGTCKIVALGDNKLRYNKKRSSCFDPLRIGNCTDHQAKGRKGGSVLK
LKAVVDVEKRVESYGSSDVEGNESDSYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVI
PGGSSGFYQKDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCKLEVIPDPTTVHFHLPN
DLSVRIHREYDDFIEELVSKFPHEKEGINKFYSECWKIFNSLNSLELKSLEEPIYLFGQF
FKKPLECLTLAYYLPQNAGDIARKYIRDPGLLSFIDAECFIVSTVNALQTPMINASMVLC
DRHFGGINYPVGGVGKIAKSLAKGLVDQGSQILYRANVTSIILDNGKAVGVKLSDGRKFY
AKTIVSNATRWDTFGKLLKAENLPKEEENFQKAYVKAPSFLSIHMGVKADVLPPDTDCHH
FILEDNWTNLEKPYGSIFLSIPTVLDSSLAPEGQHILHIFTTSSIEDWEGLSRKDYEAKK
ELVTERIISRLEKTLFPGLKSSIVFKEVGTPKTHRRYLARDSGTYGPMPRGTPKGLLGMP
FNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVATDLGFEKKSDVLDSGLLRLLAWL
RTLA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgggtaccttgaattttatgtttcccaattcacttcttgatggtacttgcaagattgta
gctttgggtgataacaaactcagatacaataaaaagagaagttcttgttttgaccctttg
agaattgggaattgtactgatcaccaggctaagggaagaaaagggggtagtgttttaaag
ttgaaagcagttgtagatgtagaaaaaagggtggagagttatggaagtagtgatgtagaa
ggaaatgagagtgatagctatgatgctattgttataggttcaggaataggtggattagtg
gcggcgacgcagctggcagttaagggagctaaggttttagtgttggagaagtatgttatt
cctggtggaagctctggcttttatcagaaggatggttatacgttcgatgttggttcatcg
gtgatgtttggattcagtgataagggaaacctcaatttgattactcaagcattggcagca
gtaggatgtaaactagaagttatacctgacccaacaactgtacatttccacctgccaaat
gacctttctgtccgtatacacagagaatatgatgacttcattgaagagcttgtgagtaaa
tttccacatgaaaaagaagggattaacaaattctacagtgaatgctggaagatctttaat
tctctgaattcattggaactgaagtctttggaggaacccatctacctttttggccagttt
ttcaagaagccccttgaatgcttgactctcgcctactatttgccccagaatgctggtgac
attgctcggaagtatataagagatcccgggttgctgtccttcatagatgcagagtgtttt
attgtgagtacagttaatgcattacaaacaccaatgatcaatgcaagcatggttttatgt
gacagacattttggaggaatcaactaccctgttggtggagttggcaagattgccaaatcc
ttagcaaaaggcttggttgatcagggaagtcagatactttatagagcaaatgtcacaagt
atcattttggacaatggcaaagctgttggagttaagctttctgacggaaggaagttttat
gctaaaaccatagtatcgaatgccaccagatgggatacttttggaaagctgttaaaagct
gagaatctgccaaaagaagaagaaaatttccagaaagcttatgtaaaagcaccttccttt
ctttctattcatatgggggttaaagcagatgttctcccaccagacactgattgccaccat
tttatccttgaggataattggacaaatttggagaaaccatatggaagtatattcttgagt
attccaactgttcttgattcatcattggccccagaaggacaacatattcttcacatattt
acaacatcgagcatagaagattgggagggactctctcgaaaagactatgaagcaaaaaaa
gagcttgtcaccgaaagaattataagcagacttgaaaagacactcttcccagggcttaag
tcatctattgtctttaaggaggtcggaacaccaaagacccacaggcgataccttgctcgt
gatagtggtacctatggaccaatgccacgtggaacaccaaagggattactaggaatgcct
ttcaataccactgctatagatggtctatattgtgttggcgatagttgctttccaggacaa
ggtgttatagctgtagccttttcaggagtaatgtgcgctcatcgtgttgctactgactta
ggtttcgagaaaaaatcagatgtgcttgacagtggtcttcttaggctacttgcttggtta
aggacactagcatga
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