Lycium barbarum (goji berry): 132607300
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Entry
132607300 CDS
T09483
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03030
DNA replication
lbb03410
Base excision repair
lbb03420
Nucleotide excision repair
lbb03430
Mismatch repair
lbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132607300
03410 Base excision repair
132607300
03420 Nucleotide excision repair
132607300
03430 Mismatch repair
132607300
03440 Homologous recombination
132607300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbb03032
]
132607300
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132607300
Enzymes [BR:
lbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
132607300
DNA replication proteins [BR:
lbb03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
132607300
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
132607300
MMR (mismatch excision repair)
DNA polymerase delta complex
132607300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
RNase_H_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
132607300
NCBI-ProteinID:
XP_060177200
LinkDB
All DBs
Position
8:complement(127987956..128007137)
Genome browser
AA seq
1098 aa
AA seq
DB search
MAGILTTTCKPLRGTTMNSRKRSAATPSPQQQQKHHAAMEEEDVDEDVFLEETLLQYEED
SQVLRELEEQHSLNERRQKWKRPNLSQAYISQTQSILFQQLEIDYIIGDSHKELLPNSSG
PAAILRIFGVTKEGNSVCCHVHGFEPYFYISCPPGMGPDDISRFHQILEGRMREANRNSN
VPKFVRRIEIVQKRSIMYYQQQASQPFLKIVVALPTMVTSCRGILDRGIQIDGLGMKSFL
TYESNVLFALRFMIDCNVVGGNWIEIPVGKYKKAARILSYCQLEFDCLYSDLISHSPEGE
FSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGQDQPLIQNVMTLKSCSPI
VGVDVMSFDTEKEVLLAWRDLIREVDPDIIIGYNICNFDLPYLIRRAEVLGMAEFPVLGR
IRNSRVRVKDATFSSRQHGTRESKEITIEGRVQFDLFQAVQRDHKLSSYSLNSVSAHFLS
EQKEDVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPI
SFLLSRGQSIKVLSQLLRKAKQRNLVIPNAKQAGSEQGTYEGATVLEARAGFYERPIATL
DFASLYPSIMMAYNLCYCTLVTPEEVRKLNLPPECVNKTPSGETFVKSNLQKGILPEILE
ELLAARKRAKADLKEAKDPRVRAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVT
SYGRQMIEHTKKLVEDKFTVLGGYEHNAEVIYGDTDSVMVQFGVATVEEAMKLGREAADY
ISGTFIKPIRLEFEKIYYPYLLISKKRYAGLLWTNPDKHDKMDAKGIETVRRDNCLLVKN
LVTECLNKILVDRDVPGAVQYVKNTISDLLLNRMDLSLLVITKGLTKTGDDYEVKTAHVE
LAERMRKRDAATAPGIGDRVPYVIIKAARGAKAYEKSEDPIYVLENNIPIDPQYYLDNQI
SKPLLRIFEPILKNANKELLHGSHTMSKSIPTPSNSGIMKFAKKQLTCIGCRTPISGSDR
TICNHCKEREAELYCRSVANVAELENLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRK
KAQKDMAEAKTQLDRWNF
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaattctaactacaacttgtaaacccttacggggaaccaccatgaactcaagg
aagagatcggcggcaacgccgtcacctcaacagcagcagaaacaccatgccgccatggaa
gaggaagacgtagacgaggatgtttttctcgaagaaacattgcttcagtacgaagaagat
tcacaagtacttcgtgaactcgaagaacaacattcacttaacgagcgtcgtcagaaatgg
aaacgtcctaatctctctcaagcttacatctctcaaacgcaaagcatattgtttcagcag
ctggaaattgactacattatcggagacagccataaagaattgttgcctaattcttctggt
ccggctgccattttaagaatcttcggggtcaccaaggaaggaaatagcgtctgttgtcat
gtacatggatttgaaccatacttctacattagctgccctcctggaatgggccctgacgat
atctcccgttttcaccaaattcttgagggcaggatgagagaagcgaataggaacagcaat
gtccctaagtttgtccgtcgcatcgaaatagttcagaaaagaagcatcatgtattaccaa
cagcaggcttctcagccttttctcaagattgtagtggcattgccaacaatggttaccagt
tgccgtggtatcctcgatagaggtattcaaattgacgggcttggtatgaagagctttctg
acctatgaaagtaatgttctttttgctcttcgcttcatgattgactgcaatgttgttggt
ggcaactggattgaaattccggttgggaaatacaagaaagctgcaaggattctctcctat
tgtcaattagaatttgattgtctctattctgacttgatcagccattctcctgaaggagaa
ttttcaaagatggctcccttccgcatattgagtttcgatattgaatgtgctggccgtaaa
ggccactttcctgagcctacacacgatcctgttattcaagtggccaatctagttaccttg
cagggacaggatcagccattaattcagaatgtgatgactcttaaatcatgctctcctata
gttggggttgatgttatgtcctttgacacagaaaaagaagtattgctggcctggagggac
ttgatccgggaagtggaccctgatatcataattggatataacatatgcaattttgatttg
ccgtatctcatccggagagctgaagtcttagggatggcagaatttcctgtgcttggacgc
atcagaaacagcagggttcgtgtaaaagatgcaaccttttcttcaagacagcatgggaca
agggaaagtaaagaaataacaatagaagggagagttcaatttgatttatttcaggctgtt
cagagggatcataagctaagttcttactcactaaattctgtctcagcacattttcttagt
gagcagaaagaggatgtccatcattcaattatatcagatcttcaaaatgggaactcagaa
actaggaggcggcttgctgtatattgtctaaaggatgcttatctcccacaacggcttttg
gataaattaatgttcatttataactatgtggagatggctcgagtcactggtgtacctata
tcttttcttctttcaagagggcaaagcattaaggtgctttctcaacttttacggaaggcg
aagcaaaggaatcttgtcataccaaatgcaaaacaggctggatctgaacaaggaacgtat
gagggggcaacggttttggaggcccgagctggtttctatgagaggccaattgcaacgttg
gattttgcatctctatatccatcaatcatgatggcatataatttatgttactgcacgctg
gtaactcctgaagaggttcgcaaactgaacctccctccggaatgtgtcaacaagacccct
tctggtgaaacatttgtcaagtcaaatttacagaagggaatacttccagagattcttgaa
gaactattggctgctcgtaaaagagcaaaagcagatttaaaggaagcaaaagatcctcga
gtcagagctgtcttagatggccgtcagctagctttgaagattagtgcaaattcagtatat
gggtttactggagctactgttggtcaattaccatgtttagaaatatcttcaagtgttact
agctatggtcgacagatgattgagcacacaaaaaaacttgtggaagacaagtttacagta
cttgggggctatgaacacaatgctgaggttatatatggagatacagattcggttatggtg
cagtttggtgtggctacagtggaagaggctatgaaattgggcagagaagctgctgattac
attagcgggacatttatcaaaccaataagactagaatttgagaagatttattacccatat
ctgctgattagcaagaagagatatgctggccttctatggacaaatccggacaaacatgac
aaaatggatgctaaagggattgaaactgttcggagggataattgtctcttagtcaagaac
cttgtgactgagtgtcttaataaaatactagtggacagagatgttcctggtgctgttcaa
tatgttaagaatactatctcagatcttcttctgaaccgcatggatctgtctcttttggtt
attactaagggtctgacgaaaactggagatgattatgaagtaaagacagcacatgttgaa
cttgcagagagaatgcgcaagcgagatgctgctactgcacctggtattggtgatagagta
ccttatgtcatcattaaggctgcaagaggtgccaaggcatatgaaaagtcagaggaccct
atatacgtgttagagaacaacatacctatagatcctcagtactatcttgataatcaaatt
agtaagccacttctgaggatttttgagccaatactgaagaatgcaaataaagagcttctt
cacggaagtcacacaatgtccaagtcaattccgacaccttcaaacagtggtataatgaaa
tttgccaagaagcaactcacttgcattggatgcagaacaccaatcagtggctctgatcga
actatctgcaatcactgcaaagaaagagaggctgaactttattgcagatccgtggctaat
gtggctgaactagagaatctttttgggaggctatggacacaatgccaagaatgccaaggc
tctcttcatcaggatgtcctatgcactagtcgagactgcccaattttttatcggaggaag
aaggctcagaaagacatggctgaagctaaaactcaattagatcggtggaacttttaa
DBGET
integrated database retrieval system
