Lycium barbarum (goji berry): 132607314
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Entry
132607314 CDS
T09483
Name
(RefSeq) alpha-L-arabinofuranosidase 1-like
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00520
Amino sugar and nucleotide sugar metabolism
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
132607314
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
132607314
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Gene cluster
GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
132607314
NCBI-ProteinID:
XP_060177220
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Position
8:128146005..128155851
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AA seq
673 aa
AA seq
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MESRHSLHHVLLLVLCGLSVLCKCSATGIEANQTAVLFVNASEASAKKIPDTLFGVFFEE
INHAGAGGLWAELVSNRGFEAGGPNIPSNIDPWSIIGDESSVIVSTDRSSCFERNKIAVR
VQVLCDHTGANICPDGGVGIYNPGFWGMNIEQGKSYKLVLYVRSQESINVSVALTGSKGL
QKLAGGNIIASDVSNWTKVEVMLEAKGTDPNSRLELTSSKKGVTWFDQVSLMPTDTYKGH
GFRKDLFGMIKDLKPAFIRFPGGCFVEGDWLRNAFRWKETIGQWEERPGHFGDVWNYWTD
DGLGHFEFLQLAEDLDTLPVWVFNNGVSHHDEVDTSSILPFVQEILDGLEFARGDPTSTW
GSIRSKMGHPEPFNLKYVAIGNEDCGKPKYRGNYLKFYSAIKDKYPDIKIISNCDGSSSP
LDHPADLYDFHIYSSASSVFSNARHFDSAPRRGPKAFVSEYAVTGNDAGKGSLLAALGEA
GFLIGVEKNSEAIEMASYAPLFVNDNDRRWNPDAIVFTSSQMYGTPSYWMQHFFKESNGA
TLLSSSLQANPSNSLIASAITWRNSVDNSDYLRIKVVNFGTTTVTLKISISGLGLNTLET
SFGAIKTTLTSNNVMDENSFREPKKVSPVKAMLEKVSDSMDVVVAPRSLNSFDFLRKSIS
SSVDTASVLKSSY
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgaggcattcccttcatcacgtactgcttttagttttgtgtggtttgtctgtc
ctgtgcaaatgttcggctactgggattgaagcaaaccagacagcagtattgtttgtgaat
gcatctgaagcatcagcaaagaaaatacctgatacactttttggtgtattctttgaggag
atcaatcatgctggcgctggtggattgtgggctgagcttgtcagcaacagaggttttgaa
gctggaggcccaaatataccttcaaatattgatccttggtctatcattggagacgagtcc
tcagtgattgtatcaacagaccgttcatcatgctttgagcggaataaaattgcagttcga
gtgcaggtgctatgtgaccatacaggtgccaatatctgtccagatggaggagttggcatc
tacaacccgggattctggggcatgaatattgagcagggaaagagttacaaactagtgctt
tatgttcgttcacaagaatcaatcaatgtatctgtagctttaactggttcaaagggattg
caaaagctggctggtggcaacataatagcttccgatgtttcaaattggacaaaagtggaa
gttatgttagaagcaaaaggaacagatcccaattcaagactggaattgacatcatctaag
aaaggtgttacatggtttgatcaagtgtcattaatgcctactgacacatacaaggggcat
ggcttcaggaaagatctttttggaatgattaaggatttgaaaccagcattcattagattt
ccaggtggatgttttgtcgaaggtgactggttaagaaatgcatttcggtggaaagaaacc
attggacaatgggaagagaggcctgggcatttcggtgatgtttggaattactggactgat
gatggactaggccattttgagttcttgcagcttgccgaggacttagatacactgccagtg
tgggttttcaacaatggagtcagccaccacgatgaagttgacacttccagtattttacct
ttcgtgcaagaaatactagatggtcttgagtttgcaagaggtgatcctacttcaacatgg
ggttctattcgatccaaaatgggacatccagagcccttcaatttgaaatatgtagctatc
ggaaatgaggattgtggaaagccaaaataccgtggaaattacctcaagttctactcggcc
atcaaagataaatacccagatattaagattatctcaaactgtgatggttcttcgagtcca
ctggatcacccagctgatttatatgattttcatatttatagcagcgcaagttctgtattt
tctaatgctcgccattttgatagtgcaccacgcaggggaccaaaggcttttgtgagtgag
tatgctgtgactggaaatgatgctggaaaaggtagtcttttagcagcgctgggtgaagct
gggttcctcattggggtagaaaagaacagcgaagcaattgaaatggcaagttatgcaccc
ctatttgttaatgacaatgacaggaggtggaacccagatgcaattgtcttcacctcttca
caaatgtatggaacccctagttactggatgcagcatttcttcaaagagtcaaatggcgca
actcttctgagttcatcactacaagctaatccttcaaattcactcatagcatctgccatc
acttggagaaattcagttgataacagcgattatttgagaataaaggtcgtgaactttggg
accaccacggttactcttaaaatctctatcagtggattggggctgaacacgttagagacg
tcatttggggctataaaaaccacattaacatccaataatgtgatggatgaaaattccttc
agagagcctaagaaggtatcaccagttaaagcaatgcttgagaaagttagtgacagcatg
gatgttgtagtggccccaagatccctcaattcatttgacttcttaagaaaatcaatcagc
agcagtgtggatactgcttctgtccttaaatcttcatactag
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