Lycium barbarum (goji berry): 132607356
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Entry
132607356 CDS
T09483
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbb03041
]
132607356
Spliceosome [BR:
lbb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
132607356
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_PARP14_3
RRM_10
Motif
Other DBs
NCBI-GeneID:
132607356
NCBI-ProteinID:
XP_060177272
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All DBs
Position
8:128841293..128849868
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AA seq
444 aa
AA seq
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MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVNAMQF
YSNVQPSIRGRNVYVQFSSHQELTTMDQNTQGRGDEPNRILLVSIHHVLYPMTVDVLHQV
FSPHGIVEKIVTFQKSAGFQALIQYQLLQNAVSARNSLQGRNIYDGCCQLDIQFSNLDEL
QVSYNNERSRDFTNPNLPAEQKGKSPQQGYGDAGGMYSLQVSGPRGVGFPQMGNAAAIAA
AFPGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRVKLLRNKPDHALVQ
MGDGFQAELAVHFLKGAMLFGQRLEVNYSKHPNITTGPDTHDYSNSNLNRFNRNAAKNYR
YCCSPTKMIHLSTLPQDVTEEEIMEHLEEHGPIVNTKLFEMNGKKQALVLFQNEEQATEA
LVCKHVTSLGGSTIRISFSQLHSI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgacagagccatcaaaggtcattcatgttcgcaacgtgggccatgagatctcagagaat
gacttgcttcagctatttcagccgtttggagtcattaccaaacttgtaatgcttagggca
aaaaatcaggccctcttgcaaatgcaagatgttccttctgctgtaaatgcaatgcagttc
tattcaaatgttcagcccagcataagggggagaaatgtttatgtacaattttcatctcat
caagaactgacaaccatggatcagaatacccaagggcgaggtgatgagcctaatcgaatt
ctcttagtttcaatacatcatgtgctatatcctatgactgtggatgtgctgcatcaagtt
ttttcacctcacggaattgttgagaagatcgtgacatttcagaagtcggctggttttcaa
gctttaattcagtaccaattactccagaatgctgtttctgctaggaactctctccagggg
cgtaatatatatgatggctgctgtcaacttgacatacaattctcaaacctagatgaattg
caagtgagctacaataatgaacgctcgagggacttcaccaacccaaatctaccagcagag
cagaagggcaaatcgcctcagcagggatatggagatgcaggaggcatgtactccttgcaa
gtttctgggcctcgtggagttggatttcctcagatgggaaatgctgcagccattgcagct
gcctttcctggcggtttgccccctggcataagcgggacaaatgataggtgtactgttctt
gtatctaatttaaatccagatagaatagatgaggacaagctttttaatctgttctccatt
tatggaaacattgtcagagttaagctcctgcggaataaaccagatcatgctctggttcag
atgggtgatggcttccaggcagagctggctgtgcactttttgaagggtgccatgttattt
ggccagcgtttggaggtcaactattcgaagcacccaaatattactaccggaccagacaca
catgattactcgaactcaaatctcaatcgtttcaaccggaatgctgccaaaaactaccgg
tattgttgctcccccaccaagatgatccatctgtcaaccttgcctcaggatgtgacggaa
gaagagataatggaacatttggaggagcatggtcccattgtgaacactaagctttttgaa
atgaatgggaagaagcaggctcttgttctttttcaaaatgaggagcaggcaactgaggca
ctggtgtgtaaacatgttacttcccttggcggttcgaccattcggatttcgttttctcag
ttgcatagcatctga
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