Lycium barbarum (goji berry): 132607456
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Entry
132607456 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132607456
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03440
Homologous recombination
lbb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132607456
03460 Fanconi anemia pathway
132607456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132607456
Enzymes [BR:
lbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
132607456
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
132607456
FA (Fanconi anemia) pathway
Downstream FA components
132607456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
HBB
Pex19
DUF4230
Motif
Other DBs
NCBI-GeneID:
132607456
NCBI-ProteinID:
XP_060177410
LinkDB
All DBs
Position
8:130564053..130581755
Genome browser
AA seq
1284 aa
AA seq
DB search
MKHFKRAPPPPPPPPPSATQSGPKPSKHVIHIGGIPVEFPYQPYGTQLAYMNRVIVTLDR
AHREGKSNALLESPTGTGKSLSLLCSALAWQQNFKSKNLYSNFVQSKADPKALADPIGHG
GGFIPETQPSGNPDTAPPAATNGKSKKKVAPTIFYASRTHSQLSQVIREYRKTSYRVQMA
ILASRKHYCTNMNLRGGDNIDEKCKLLLKDPEAGCSEFKNSHKVKGHPSLQKGGCHEAHD
IEDLVKVGQIVKGCSYFAARSMADDAELVFCPYSYIINPVVRRAMEVDIKGAIIILDEAH
NIEDMCRDAGSVDVEEDILLQLQMELGQLTQSDTMTYQPLVELTQDILNWIDRKKNTLER
RDFQRYASCWTGDKALKELQEANVTKQCFPILQECASKAIKAASEAEPETDHLSGMAASV
LEGLFSSLNYFFSGDGLHLCDYQLALQRYVKKSPGTAVGSWTHAFSLWCLNPAVVFNEIA
DSCLSVILTSGTLSPMDSFSSELGVTFGTSLEAPHVIDVESQLWAAVISRGPRNYPLNAS
FKTADSYAFQDALGSSLEEICKIVPDGCLVFFPSYKLMEKLSSRWKETGQWARLNARKPI
FVEPRGGQEEFELILNGYYSSINQRDKLVTGRKKKAKKSALSDSNPREVSDENKKEGAAF
LAVCRGKVSEGIDFSDEKARVVIVVGIPFPNINDIQVDLKKKFNNTYKSSKNLLSGGEWY
CNQAFRALNQATGRCIRHKFDYGAVIFLDERFCEARNRAYISKWVRNSIRHYSSFDKSIE
ELKSFFRDVKERVGKAASSLQSSVIDVEENASVTKSVRTRQKNQKLSTSDVKGLKEEENG
ALISQKAPLLCQSSRNDTMYNTSSTKMRVDALHLMLSDDKDSDGCRSYIDLECDSEKSSR
FSGDPLMVSHPADPELTIVKETPAADNIIHISSPQSFSKDEYSCLTIIQESGNLSDHLAN
HPITQQNTELGCKSPCLMITPQKDVYGKANMISFDVESSINSSVNSHVGKRIKRLDLSSI
SHIHAEEFDTQMTKTPIHDSSTCRSRKIKDANQRIGSGCRIVQLDKELEKSKFPGSPVLN
YCETSVVQSKLAMDERLQIFCSLCNNPLGLPENNLFVMCSRTSSSKTHLKSLWKGQTEAP
DPSKHNIPILIANFSSVDQRIYERTSDSLSVQGIWCKEDGCVFKTIFCPFCVNSRHCLGA
QVMATDASNVQLLNKVLLYCNCLVIKGPEASRKELSPSSNSSSDRGLNSIESFTFTPQQQ
NGGWRTTKSKMRLPKRSISSSAQM
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgaagcattttaaacgagcaccaccgccgccgccaccaccaccaccgtcagccacccaa
agcggccctaaaccgtcaaaacacgtaatacatataggcggcattccggtagagtttcct
taccaaccttacggcacccaattagcttacatgaatcgagtcattgttacacttgatcga
gcacatagggaaggtaaatctaacgcgttgctcgaatcgcctaccggtactggaaaatcg
ctgtctctactttgttcggctcttgcttggcaacagaatttcaagtcgaagaatttgtat
agcaattttgttcaatctaaggctgatccgaaagccctagctgatcctattggtcatggc
ggtggatttattcctgaaacgcagccttcagggaacccggatacagcaccacctgctgca
actaatgggaagagcaagaaaaaagtggcacctaccatcttttatgcctcgaggacacat
tcacaactttctcaagtgattcgggaatacagaaagacaagttatcgggtccaaatggct
atactggcttcacgaaaacactactgtacaaatatgaacttacgaggtggagacaacatt
gatgagaaatgcaagctgttattaaaggatccggaggctgggtgctcagaattcaaaaat
tctcataaagtcaaaggtcatccatcccttcagaaaggagggtgccacgaggctcatgat
attgaagatcttgttaaagttggacaaattgttaaaggctgctcatactttgcagcacgt
tctatggctgatgacgcggagttagtgttctgtccatacagttatatcatcaatccagtt
gtcaggagagcaatggaagtagatataaaaggagccatcattattcttgatgaagcccac
aatatagaagacatgtgtcgtgatgctggtagtgttgatgttgaggaggatattttgctt
cagttgcagatggaacttgggcaactcacacaatctgatacaatgacttaccaacctttg
gtagaactgacacaggacatactgaattggatagataggaagaaaaatactttagaaagg
cgggacttccaacgttatgcctcatgttggactggtgacaaggccttgaaagagctacaa
gaagccaatgtgacaaagcagtgctttcccattttacaggaatgtgcttcgaaggccatc
aaagccgcatctgaagctgagccagagacagatcatttgagtggcatggcagcatctgta
ttagaaggactattttcctcacttaattacttcttctcgggagatgggcttcatttgtgt
gattaccagctagctttacaacgctatgtcaagaaaagtcccggaactgctgttggtagc
tggacacatgcttttagtttgtggtgcttaaatccagccgttgtgttcaatgaaattgct
gattcttgtctatcagtgattctaacatcagggactctttcaccaatggattcattttcc
tctgaacttggcgttacctttggtacttctctggaagctccacatgtcatagacgttgaa
tcacagttatgggctgctgtaatctcaagaggaccaagaaattatccgttgaatgcaagc
ttcaaaacagctgattcatatgcttttcaggatgcacttggctcatctttagaggaaata
tgcaagattgttccagatggttgtcttgtattctttcccagctataagctaatggagaaa
ctaagcagccgctggaaagaaacaggtcaatgggcccgtcttaatgctcgaaagcccata
tttgttgagccaagagggggtcaagaagaatttgaattaattttaaatggttactacagt
tctattaaccaaagggataaactagtgacgggaagaaagaagaaggcaaaaaagtcggct
cttagcgacagtaatccacgtgaggtttcagatgaaaacaagaaagagggagctgctttt
cttgctgtttgccgaggaaaggtttctgaaggcatagacttttctgatgagaaggctcgt
gtagtcatagttgtaggcattccctttccaaacataaatgatattcaagtcgatcttaag
aagaagttcaataatacttataagtcatccaaaaatcttctgagtgggggtgagtggtat
tgcaatcaagccttcagagctcttaatcaggctacaggtcgttgcattcgccataaattt
gactatggagctgtgatctttttagatgagcgtttctgtgaggcaaggaatagagcttat
atttcaaagtgggtgcggaattcaataagacactacagcagctttgacaagtcaatagaa
gaactaaaatcctttttccgagatgtcaaagagcgtgttggcaaggcagccagttcctta
caaagttctgttattgatgttgaagaaaatgcttctgttactaagagcgtaagaaccagg
cagaaaaatcagaagttgagcacttctgatgtgaaagggcttaaggaagaagaaaatggt
gcattgattagtcaaaaagctcctctcctatgtcaatcttcacgtaatgataccatgtat
aatacgtcctccactaaaatgagagttgatgccctgcatttgatgttaagtgatgacaag
gattctgatggttgcagaagttacatcgatttggaatgtgattcagaaaaatcatctagg
ttctctggagatccattgatggtttcacaccccgctgaccctgaattaaccattgtaaaa
gaaactcctgctgctgataacattattcacatttctagtcctcaatccttctccaaggat
gaatattcttgcttaaccattattcaagaatctggtaatctttcagatcatttggcaaat
catcctataactcaacaaaatactgagttgggttgtaaatctccctgtttgatgattact
cctcaaaaagatgtttatggaaaagcaaacatgatatcatttgatgttgaatcatcaatt
aactcaagtgtcaattctcatgtggggaaaaggataaaacgtttggatttgtcatccata
agtcatatccatgcagaagaatttgatactcagatgaccaagactcctatacatgatagt
tctacgtgcagatcaaggaagatcaaagatgcgaaccagaggattggttctggttgcaga
attgttcagttagacaaggaattggagaagtccaaatttcctgggtcaccagtcctgaat
tactgtgagacatcagttgtgcagtctaaacttgctatggacgaaagactacagatattt
tgctcactttgcaataatccattggggctacctgagaataatttatttgttatgtgctca
cgaacttcgtcatcaaaaactcacttgaaatctctttggaagggtcaaacagaagcccct
gatccgagcaaacataatatacctattctcatagctaacttttcatctgttgatcaacgc
atctatgaaagaaccagtgatagcttatctgttcaggggatttggtgcaaagaagatggt
tgtgttttcaaaactattttctgccccttttgtgtaaattctaggcactgtcttggtgca
caggtcatggctactgatgcgtctaatgtccagttactaaataaggtgctgctttattgt
aattgcttggtgataaagggacctgaagcatcaagaaaggaattatctccatccagcaat
tcaagctctgacagaggtcttaattccattgagagtttcacatttactcctcagcagcag
aatggaggatggagaactacaaaatccaagatgcgattaccaaagcggagcatctcatcg
agtgcacagatgtga
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integrated database retrieval system
