Lycium barbarum (goji berry): 132607523
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Entry
132607523 CDS
T09483
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132607523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132607523
Enzymes [BR:
lbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132607523
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
132607523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
132607523
NCBI-ProteinID:
XP_060177517
LinkDB
All DBs
Position
8:complement(131861974..131870301)
Genome browser
AA seq
1147 aa
AA seq
DB search
MSNTTDDLSHGIDKQHLASPIKNMVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIKKIV
RANQEIRSTLDPNIYLRYRDVHIGEPSVIFDAVTEKLCPQKCRLSDITYAAPIYVNIEYT
TGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKGTEK
VILIQEQLSKNRIIIDTDKKGCVQASVTSSTEKTKSKTIIKMEKEKIYLELNMFKTKVPI
MVVMKAMGMESDQEVVQMIGRDPRFSYLLLPSIEECANLKLYTQQAALEFLESDKMLKMP
SWSTGPVTKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMDDKD
YVGNKRLELSGQLLSLLFEDLFKTMNDEARKTVDTLLARPSRSSRLDISQYIVKDSITVG
LERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTRISPQFEKSRKVSGPRALQPS
QFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSAEELHMP
SSYLITLNGLILGKHKSPQRFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGGRVCR
PLVIADKGVSRIKEHHMRELRDGVRDFDSFLRDGLIEYLDVNEENNTLIALYEKEATPET
THIEIEPLTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYFLVY
PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK
YSAICQKYENGTSDRIIKPQRQGYEADRMQILDDDGMAAPGEIIRPHDIYINKESPTVTR
TSITSPMGLPDSAYKPSRQTYKGPEGETAVVDRVALYSDKNNNLSIKFMIRHTRRPEIGD
KFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSC
GRFHYGSAFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQ
KLKHMVLDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMV
SSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLIQELQSMNIVP
RLKLAEA
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatacgacagacgacttgagccatggaattgacaagcagcaccttgcttctccc
attaagaatatggtggacaagtatcagcttgttccagaattcctaaaggtgagaggatta
gtgaagcaacacttggactcgttcaattattttgttagaactgaaataaagaagattgtc
cgagcgaatcaggagattagatcgacattggaccctaatatttatcttaggtacagggat
gtccacattggtgaaccatcagtgatttttgatgctgtaacggagaaactatgtccacag
aaatgccggctttcagacattacctacgcggctccaatttatgtcaacatcgaatacaca
acgggaagtcatgggcagacatcagtgtccacaaagaagaatgttatcattggaaggatg
ccaattatgctaagaagcagttgttgtgtgctatatggaaaagatgaagacgaactagca
agacttggagaatgcccacttgatcctggaggatattttgtaatcaaaggcactgagaag
gtaattttaattcaagagcagctctcaaagaacaggataatcattgatacagataaaaaa
ggttgtgtacaagcatctgttaccagcagcacagaaaaaacgaagagcaaaacaattata
aaaatggagaaagaaaagatatacttagagttgaatatgttcaaaaccaaggtccccata
atggttgtcatgaaggccatgggtatggagagtgatcaagaggttgtgcaaatgatagga
agagatcctcggtttagttatctgcttttgccatcaatcgaggagtgtgcaaatctcaag
ttgtatacacaacaagcagcattggagttcctcgagagtgacaagatgcttaaaatgcct
tcatggtctactggtccagttacgaagggagcccgagctttgagtattcttcgtgacata
tttcttgcaaatgttcccgtccatcagcataatttccgcaaaaaatgcatatatgttgca
gtaatgatgaggcgcatgatggaagcaatcttaaacaaggatgcaatggatgacaaggat
tatgtggggaacaaacgattggagctctccggtcagctactatctctcctttttgaggat
ttgttcaagacgatgaatgatgaagctaggaagacagttgatacgcttctagccaggcct
agtcgctccagtcgtttggacatttctcaatacatagttaaagatagtataactgtgggc
ctggagagaaccctatctacaggcaattgggatgttaaacgatttaggatgcacaggaaa
ggcatgactcaggttgttgctaggttatcatacattgggtcattgggtcacatgacaagg
atctcaccacagttcgaaaagtctagaaaagttagtggtcctagagcactgcaacctagc
cagtttggcatgctctgcccttgtgataccccagaaggtgaagcttgtggattggtgaaa
aacttggccttgatgactcatgttacgacagatgaagatgagcgccctattatgtctctg
tgctactgcttgggtgttgaggacttggaacagctttcggcagaagaacttcacatgcca
agttcctatcttatcacattaaatggacttattctaggcaagcacaagagtccacagcga
tttgctaatgcaatgaggaagctacgaagggctggtaaaattggggagtttgtaagcatc
tttgtgaatgaaaagcagcgctgtgtctacattgcttcagatggtgggcgtgtatgtcgt
ccacttgtcattgctgacaaaggtgtttccaggatcaaggagcaccacatgagagagttg
agggatggtgtgcgtgacttcgacagctttctaagggatggtttgatagaatatcttgat
gtcaacgaggagaacaacacattgattgctctatacgaaaaggaggctacaccggagaca
acacatattgagattgagcctctcacaatcttaggtgtttgtgccggtttgataccttat
cctcatcacaatcagtcccctaggaatacctatcaatgtgctatgggtaagcaagctatg
ggaaatattgcctataaccagttgaatcgcatggatggtttgctctactttttggtgtat
cctcaacgccctttactgactacaagaacgatcgagctggttggatatgataaactaggg
gctggtcagaatgccactgttgctgtgatgagttatagtggctatgacattgaggatgca
atagtaatgaacaagtcttctttggatcgaggttttgggcgttgcatagtgatgaaaaaa
tactcagccatatgtcagaagtatgagaacggcacatcagatagaataattaaaccacag
cgtcaaggatatgaagctgacaggatgcagattctggatgatgatggaatggctgctcca
ggagaaattattcgacctcatgatatctatatcaacaaggagtcccctacagtcacgagg
acatcaatcacgtctcctatgggcttgccggatagtgcatacaagccaagtagacaaact
tataaaggccctgaaggggagacagctgtcgttgatagagtggctctttactctgataaa
aacaacaatttaagcatcaaatttatgatccgtcatacccgcaggcctgagattggtgac
aagttcagcagtagacacgggcagaaaggagtctgtggcaccattgtacaacaggaagat
tttccattctctgaacgtggcatttgccctgatcttattatgaatcctcatggatttcct
agccgaatgacagtgggaaagatgatagagcttcttggaagtaaagctggagtttcatgt
ggtaggtttcattacggcagtgctttcggagaacccagtggtcatgcagacacggttgat
gctatcagtgaaactctggtaaagcatggttttagctacaacggcaaggattttatttat
tcaggtattactggtatgccactacaagcatacatcttcatggggccaatatattaccaa
aagcttaagcacatggtcctagacaaaatgcatgctcgcgggagtgggcctcgtgttatg
atgacaagacaacctaccgaagggaggagtagaaatggaggtttacgtgtgggagaaatg
gaacgtgattgtttgattgcatatggtgccagtatgttgatatatgagcgcttaatggtt
tccagtgatccatttgaggttcaggtttgccgaaaatgtggtttattggggtattacaac
tacaagctgaagactggcatttgttctatgtgcaagaatggagaaaatatatctacgatg
aagttgccttatgcatgcaaactcctaatccaggagctccaatcaatgaacattgtcccg
cgattaaaactagcagaagcttga
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