Lycium barbarum (goji berry): 132607524
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Entry
132607524 CDS
T09483
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132607524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132607524
Enzymes [BR:
lbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132607524
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
132607524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
132607524
NCBI-ProteinID:
XP_060177518
LinkDB
All DBs
Position
8:complement(131874087..131879193)
Genome browser
AA seq
1149 aa
AA seq
DB search
MSSGCDPTMSNSTNNLSHGIDKQYLASPIKNMVDKYQLIPEFLKVRGLVKQHLASFDYFV
KTEIKKIVRANYEIRSIRDPNIYVRYRDVHIGEPSMIYDGVTEKLSPQKCRLSNLSYAAP
IYVTVDYTTKGKGQLSLATRKVIIGRMPIMLRSCCCVLYGKDEEQLAKLGECPLDPGGYF
VIKGTEKVILIQEQLSKNRIIIDTDKKGCVQASVISSTEKTKSKTIIKMEKEKIYLELNM
FKTKVPIMVVMKAMGMESDQEVLQMIGRDPRFSALLLPSIEECANLNVYAQHQALEFLES
DKMLKMFSYSAGLVEKGARALSILRDIFLANVPVHQDNFRKKCIYVAVMMRRLMEAILNK
DAMDDKDYVGNKRLELSGQLLSLLFEDLFKTMNDQVRKEFDASPNALDILSFIGRYQGIT
EGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTRISPQFEKSRKVSGPRALQ
PSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPISFLCYCLGVEDLEQLSAEELH
MPSSYLIILNGLILGKHKYPQRFANGMRKLRRAGKIGEFVSIFVNEKQRCIYIASDGGRV
CRPLVIADKGVSRIKEQHMKELRDGVRDFNSFLRDGLIEYLDVNEENNSLIALYEKEATP
ETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDSLLYFL
VYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVM
KKYSALCQKYKNGTSDRIIKPQRQGYEADRMQILDDDGMAAPGEIIRPHDIYINKESPTV
TLTPVTSPMGLPDSAYKPSRQTYKGPEGETAVVDRVALHSDENNNLSIKFMIRHTRRPEI
GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAAV
SCGRFHYGSAFGEPSGHADTVEAISETLVKHGYSYNGKDFLYSGITGMPLQAYIFMGPIY
YQKLKHMVIDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERL
MISSDPFEVQVCRKCGLLGYYNYKLKSGFCSMCKNGENMSTMKLPYACKLLIQELQSMNI
VPRLKLAEA
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgggttgcgatcctactatgtccaattcaacaaataacttgagccacggaatt
gacaagcagtaccttgcttctcccattaagaatatggtggacaagtatcaacttattcca
gaattcctaaaggtgagaggattggtgaagcaacacttggcttccttcgattactttgtt
aagacagaaataaagaagattgtccgcgcgaattatgagattagatcgatacgagacccc
aatatttatgttaggtaccgggatgtccatattggtgaaccgtcaatgatttatgatggt
gtaactgagaaactaagtccacagaaatgcaggttatccaaccttagctatgcggctcca
atttatgtcacagttgactacacaacgaaaggaaaagggcagttatcattggcaacaagg
aaggttatcattggaaggatgcctattatgctaagaagttgttgttgtgtgctatatggg
aaagatgaagaacaactagcaaaacttggagaatgcccacttgatccaggaggatatttt
gttatcaaaggtaccgagaaggtaattttaattcaagagcagctctcaaagaacaggata
ataattgatacagataaaaaaggttgtgtacaagcatctgttatcagcagcacagaaaaa
acaaaaagcaaaacaattataaaaatggagaaagaaaagatatacttagagttgaatatg
ttcaaaaccaaggtccccataatggttgtcatgaaggccatgggtatggagagcgatcaa
gaggtcctacaaatgataggaagagatcctcggtttagtgctctgcttttgccatcaatc
gaggagtgtgcaaatctgaacgtgtatgcgcaacatcaagcattagagttcctcgagagt
gataagatgcttaaaatgttttcatattctgctggtctagttgagaagggagcccgagct
ttaagtattcttcgtgacatatttcttgcaaatgttccagtccatcaggataatttccgc
aaaaaatgcatttatgttgcagtaatgatgaggcgcctgatggaagcaattttaaacaag
gatgcaatggatgacaaggactatgtggggaacaaacgattggagctctccggtcagcta
ctgtctctcctttttgaggatttattcaagacgatgaatgatcaagttaggaaggaattt
gatgctagccccaatgctttggacattttaagttttataggcagatatcagggtattact
gagggcctggagagaaccctatctacaggcaactgggatgttaaacgatttaggatgcac
aggaaaggcatgactcaggtagttgctaggttatcatacatcggaacgttgggccacatg
acgaggatctcaccacagttcgaaaagtctagaaaagttagtggtcctagagcactgcaa
cctagccagtttggcatgctttgcccttgtgataccccagaaggtgaagcttgtggattg
gtgaaaaacctggccttgatgacacatgttacgaccgatgaggatgagcgccctattagt
tttttgtgctactgcttgggtgttgaggacttggaacaactttcagcagaagaacttcac
atgccaagttcttatctcatcatattaaatggacttattctaggcaagcacaagtatcca
caacgatttgctaatggaatgaggaagctacggagggctggtaaaatcggggagtttgta
agcatctttgtgaatgaaaagcagcgttgcatctacattgcttcagacggtggacgcgtc
tgtcgtccacttgtaattgctgacaaaggtgtttccaggatcaaggagcagcacatgaaa
gagttgagggatggtgtgcgtgacttcaacagctttctaagggatggtttgatagaatat
cttgatgtcaacgaggagaacaactcattgattgctctatatgaaaaggaggccacacca
gagacaactcatattgagattgagcctttcacaatattaggtgtttgtgccggtttgata
ccttatcctcatcacaatcagtcccctaggaatacctatcagtgtgctatgggcaagcag
gcaatgggaaacattgcctataaccagttgaatcgcatggacagtttgctctactttttg
gtgtatcctcaacgccctttactgactacaagaactatcgagctggttgggtatgataaa
ctaggggctggtcagaatgccactgttgctgtgatgagttatagtggctatgacattgag
gatgcaatagtaatgaacaagtcttctttggatcgaggttttggacgttgcatagtgatg
aaaaaatactcagccttatgtcagaaatataagaatgggacatcagatagaataattaaa
ccacagcgtcaaggatatgaagctgacaggatgcagattctggatgatgatggaatggct
gctccaggagaaattattcgacctcatgatatctatatcaacaaggagtcccctacagtc
acgctgacgccagtcacgtctcctatgggcttgccggatagtgcatacaagccaagtaga
caaacttataaaggccctgaaggggagacagctgtcgttgatagagtggctcttcactca
gatgaaaacaacaatttaagcatcaaatttatgatccgtcatacccgcagacctgagatt
ggtgacaagttcagcagtagacatgggcagaaaggagtctgtggcaccattgtacaacag
gaagattttccgttttctgaacgtggcatctgccctgatcttattatgaatcctcatgga
tttccaagccgaatgacagtgggaaagatgatagagcttcttggaagtaaagctgcagtt
tcatgtggtaggtttcattacggcagcgctttcggagaacccagtggtcatgcagacacg
gttgaagctatcagtgaaactctcgtaaaacatggctacagctataatggcaaggacttt
ctttattcaggtattactggtatgccactacaagcatacatcttcatgggaccaatatat
taccaaaagctgaaacacatggtcatagataaaatgcatgctcgggggagtgggcctcgt
gttatgatgacgagacaacctaccgaaggaaggagtagaaatggaggtttacgtgtggga
gaaatggaacgtgattgcttgattgcatatggtgcaagtatgttgatatacgagcgtttg
atgatttcaagtgatccgttcgaggttcaggtttgccgaaaatgtggtttattgggatac
tacaactacaagctgaagagtggattttgttccatgtgcaagaatggggaaaatatgtct
acaatgaagttgccttatgcatgcaaactcctaatccaggagctccaatcaatgaatatt
gtcccgcgattaaaactagcggaagcttga
DBGET
integrated database retrieval system
