Lycium barbarum (goji berry): 132608043
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Entry
132608043 CDS
T09483
Name
(RefSeq) protein transport protein SEC24 B-like
KO
K14007
protein transport protein SEC24
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132608043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132608043
Membrane trafficking [BR:
lbb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
132608043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
V-ATPase_G_2
Motif
Other DBs
NCBI-GeneID:
132608043
NCBI-ProteinID:
XP_060178105
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Position
1:170718367..170736420
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AA seq
1070 aa
AA seq
DB search
MAAPGRPRPRNAPPPNYNPNALADGMQNLQVNRPNQPPSAPRPNTPFGQQPPFAGGPPVG
RPGPPPPGVFPRGPAPPSGPPHTGLPPPMAQSVPPFASRPPPPGVMRPSMGGAAPPPGSL
PSALGPRPGPPGPFSSSPLTTGPAVPPPSSIPSSVSNGPLAGGPGMMQGGARFPPPSSTT
RPPFGGPPPAMGSSGASSQPSGMRSPFGSSSSVSTTPVTAQPPPPFSGSFQNVPPPSGSS
PFGAPVQGMPPPMGAPYGTQSWQPHQGAPPSAIPGSMQPPSMYGMPPPLPNQAVASITPS
IGHTSPSKVDPNQIPRPIPNASVVLHETRQGNQANPPPPATSDYIVRDTGNCSPRYMRCT
INQIPCTADLLTTSAIQLALLVQPLALPHPSEEPLQVVDFGESGPVRCSRCKGYINPFVK
FIDQGRRFICNFCGHTDETPRDYQCNLGPDGRRRDADERPELCRGTVEFVATKEYMVRDP
MPAVYFFLIDVSMNAIQTGATAAACSAISQVISDLPDGPRTLVGVATFDSTIHFYNLKRA
LQQPLMLIVPDVQDVYTPLQTDVIVQLSECRQHLELLLESIPTMFQNNRTADSAFGAAVK
AAFLAMKSTGGKLLVFQSVLPSTGIGALSAREAEGRTNVSAAEKEAHKLLQPADKTLKTM
AIEFAEYQVCVDVFLTTQSYVDIASISVIPRTTGGQVYYYFPFSALADTAKLYNDLRWNI
TRPQGFEAVMRVRCSQGLQVQEYSGNYCKRIPTDVDLPAIDCDKTIMVTLKHDDKLQDGS
ECSFQSAVLYTTIDGQRRIRVSTLALPCTTMLSNLFKSADLDTQFACILKQAASEVPTAP
LSRIREQVTNLCINILHSYRKFCATVSSSGQLILPEALKLLPLYTLALVKSPGLRTDGQI
DSRSFWINYVSPLSTPLAIPLVYPRLIAIHELDTKENDDSLIPPPIPLSSEHITDNGIYL
LENGEDCLIYVGNSADANVIRQLLGISSVEEIPAQFVLQQYDNPLSKKLNDIINDIRRQR
CNYLRLKLCKKGDSSGMLFLSHMVEDKTQSGLSYVEFLVHIHRHIQNKMA
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggcagctccagggagacctagaccaaggaatgcgccaccacccaattataaccctaat
gcacttgctgatggtatgcaaaacctacaagtaaataggcccaatcagccacctagtgct
cctaggcctaataccccatttgggcagcagccaccttttgctggtggaccacctgttggt
cgtccaggacctccaccacctggtgttttcccaagaggtcctgcacctcctagtggtcct
ccacacactggattgcctcctcccatggctcagtctgttcctccctttgcatctcggcca
cctcctcctggtgtaatgcgtccttctatgggtggtgcagccccaccgcctggatctttg
ccttctgcattgggtcctcgtccagggcctccgggtcccttttcttcttcgccgctgaca
acaggtcctgctgtgccgccaccatcaagcattcctagctcggttagtaatgggccactg
gcaggtgggccgggaatgatgcagggcggagcacgttttcctcctccaagcagtacaacg
aggccaccatttggaggtcctccgccagctatgggttcatctggcgcttcttctcagcct
tcaggaatgcgctcaccctttggaagttcgtcatctgtcagcacaacaccagttacagca
caaccaccaccaccattttcaggatcatttcagaatgtgccacctccttcaggttcctcc
ccatttggagcacctgttcaaggcatgcctccacccatgggtgctccttatggaacacag
tcgtggcaaccccatcagggggcaccaccttctgctatccctggttcaatgcaaccacca
agtatgtatgggatgccgcctcctcttccaaatcaggcagtggcttcaataactccctct
attggccataccagcccatcaaaagttgatcccaatcaaatcccgcgccctattccaaat
gcttctgtagttctgcatgaaacccgacaaggcaaccaagccaatccccctccgcctgcc
acaagtgactatattgttagagacactggaaattgcagcccacggtacatgaggtgtact
attaatcagattccatgcactgctgaccttttgacaacctcggcaattcaattggcttta
ttggtccagcccttggctcttcctcatccatctgaagagcccctccaggtggttgatttt
ggggaaagtggtcctgttcggtgctcccgttgcaaaggctatataaatcctttcgtgaag
ttcattgaccagggaagacgtttcatctgtaacttctgtggacataccgatgaaactcca
cgggactatcagtgcaacttaggtccagatggcaggcgtagggatgctgatgaaaggcct
gaactatgccgcggaaccgttgagtttgtcgctaccaaggaatatatggtgcgagatcca
atgcccgctgtgtatttcttcctgatagatgtttccatgaatgccatacagacgggtgca
actgcagctgcttgcagtgcgatcagccaagttatttctgatctccctgatggtcctcgg
acattggttggagttgctacattcgactcgactatccacttttacaatctcaagcgtgca
ttgcagcagccattgatgcttatagtccctgatgtccaagatgtttacaccccccttcag
actgatgttattgtgcagctctcagagtgccgtcaacacctagagcttctcctagaaagc
attccaacaatgttccagaacaacaggactgctgattcagcttttggagctgcagtcaag
gctgctttcttggcaatgaaaagcactggaggcaaacttcttgtgtttcaatcagtcctg
ccatctactggtattggagccctttctgctagagaggctgaaggaagaaccaatgtatca
gctgcagaaaaggaggctcacaaattactccagccggctgacaaaactctgaagacaatg
gctattgagtttgccgagtatcaggtctgtgttgacgtgtttctcacaactcaatcttat
gtagacattgcctctatctcggtcattcctaggaccactggtgggcaggtgtactactat
ttccctttctctgctcttgctgatactgccaagctatacaatgatcttcgatggaatatc
actaggccccaagggttcgaggcagtaatgcgtgtaagatgtagtcagggccttcaagtt
caggagtactctggaaattactgtaaaagaattccaaccgatgttgatctgcctgcgatt
gactgtgataaaacaattatggtgacactgaaacacgatgacaagttgcaggatggttca
gaatgttcgtttcagtctgccgttctttacactaccatcgatggccaaagaagaatccga
gtgtcaactttggctctgccttgcacaactatgttgagtaacctgtttaaatcagctgac
ttggacacccaatttgcttgcatcttaaagcaagcggccagtgaagtaccaactgctcct
ctctcacggatcagagaacaagtgacaaacctttgcatcaacattctgcactcttatcgt
aaattctgtgccacagtgtcatcctcgggacaactcatccttcctgaggcacttaaactt
cttcctctttatacactggctttggttaaaagccctggacttaggacagatggacagatt
gatagtagatccttctggattaattatgtttccccactctctactccattggcaatccct
ctggtctaccccagattgatagcaattcacgaactcgatacgaaggagaatgacgattct
cttattcctcctcctattccactttccagtgaacacattactgacaatggtatctatctt
ctcgagaacggtgaggactgtttgatatatgttgggaactccgcagatgctaatgttatc
cgtcagctgctaggcatttcatctgttgaagaaattcctgctcagtttgttctgcagcag
tatgacaatccgctctctaagaagctcaatgacatcattaatgatattagacgccaaagg
tgtaactatctccgcttaaaattatgcaaaaagggagattcatcaggcatgttatttctc
tcgcacatggtagaagacaagacacaaagtggactttcatatgtggagtttctagtacat
atccatcggcatattcaaaacaaaatggcttga
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