Lycium barbarum (goji berry): 132608765
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Entry
132608765 CDS
T09483
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
132608765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132608765
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
132608765
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
132608765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
HIRAN
FAN1_HTH
RNF220
Sgf11
Motif
Other DBs
NCBI-GeneID:
132608765
NCBI-ProteinID:
XP_060178484
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All DBs
Position
9:complement(521328..534129)
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AA seq
996 aa
AA seq
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MLKGRESLVRLIGRRRRHRRHSLLTSTQGLEIAPKEDKDEVSTVNGNGNEGEEMVDCPVC
RKKVRGEINSHLDKCLARGTKRKLSQCTLFQLKFCTRPKVTVSSVESNFTRTDVGPRAGD
GNICDLASEISSSDGPENNVQDESNSSSVSLTLTTNRSKICTGESSICNGVNRMENLDGL
VKLDDECKLLSGAKSTISRLEDSPHHQISDDRIDNITHSPLSPSENRTSKCVEPLEDDDN
SKILLDTFIVGRKFGDDIELTIGAMVMLSRDSQNVKDPNAIKVLTEDTGQSKELGFIPRE
LAQYLSPLIDKFQLMFEGHITSIPQHPRAVVPIQICSSSIGSFDEKDSSSFQEFNSFRRN
ALCAAEFSKTHPPIPAKYQHNLLLLLKEVLKSNAHLFTEGEKTLLKSFLSLSDDSQRLFA
RLYARKGPWFRMASISYAEICDYEEAVKGLSGRHIVLHCEAECVSLFESIDKLQIDDLKE
VLNVLNVGELRDLVCSLNKSHKKITQNSDHGTRKQDYVARVLGAYESGLCPNLPSMILGK
TGSCVRISASAESVFWRAERLFFLNGEQDLSAFLLVDLGIVKYPAYNCIFTDQIFPDRSD
LLSYEEAIEVAQGMDESLDENNNELVSRCIEISASHVSSFVEEDRSSDSGSMAAFLSCFS
ASWVYSKVILLGVSFLEHERRYKDAIDLLKLLLVKFKSDRRRGYWTLRLSVDLEHVGCLD
ESLEVAEKGLLDPWVRAGSIVALQRRVLRLGKPPRRWKTPSFSDSVNRKIVEVHVQGRPV
NCKTGVKNVFYGEDGKRCGVEELALEYYAGEGGCWQGVHTESGIWLTIFGLLMWDVVFAD
VPNVFRTKFQTAPLDLETDSFYEVRRGLVEALLDKIEHGMAEELLIMSWESHVGTACRGV
NWDKHSLSELRAAVTCIGGPCLASICRNLAQDYRSWSSGMPDLLLWRFHDDYRGEAKLVE
VKGPRDRLSEQQRAWLLFLMDCGFNVEVCKVSHAPI
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaggtcgagaaagcttagtcagattaattggtcgccgtcgccgtcatcgccgt
cactctcttctcacctctactcagggacttgaaattgctcctaaggaagataaggatgag
gtaagcactgttaatggaaatggaaatgaaggtgaagaaatggttgattgtcctgtatgt
cgaaagaaggttcgaggcgagattaactctcatttagataagtgccttgctagaggaact
aagcgaaaattgagtcagtgcacccttttccagttgaaattctgcacacgacctaaagta
acagtctcatcagtcgagtcaaactttacaaggaccgacgttggtccgagagccggtgat
ggtaatatctgtgatctggcttctgaaattagcagctcagatggtcccgaaaataatgta
caagatgagtccaattcatcatcagtctcacttactttgacaaccaacagatccaaaatt
tgtacaggagagagtagtatttgtaatggggttaatagaatggaaaacttagatggtctc
gtcaaattggatgatgaatgcaaacttctgtctggtgcaaagtccacaatttctaggcta
gaggattctcctcaccaccaaataagtgatgatagaattgacaacatcacacactcacct
ttgtcaccttctgaaaacaggacgtctaaatgtgtggaacctttggaagatgatgataac
tctaagattttgctggatactttcattgttggccgtaagtttggtgatgacatagagtta
actattggagcaatggtaatgctgtcaagggattcccagaatgtcaaggatccgaatgca
atcaaggttctgacggaagatactggtcagagtaaagagctaggtttcattcccagggaa
ttggcacagtatttatctccattgatagacaagttccaactgatgtttgagggacatata
acttctattccacagcatcctcgtgcagttgtcccaattcagatatgttcctctagcatt
gggtcttttgacgaaaaggactcctctagtttccaagaattcaattcctttcgaagaaat
gctctatgtgctgctgaattctccaagactcaccctcctatccctgcaaaataccagcat
aaccttctacttttactaaaagaggttttgaagagcaatgcacaccttttcactgaaggc
gagaagaccttattgaaatcttttttatcactctcagatgatagtcaaaggctctttgct
cggctttatgcacgtaaaggtccatggtttcggatggctagcatatcatatgccgaaata
tgtgattatgaagaagctgttaaggggctttctggtagacacattgtattacattgtgaa
gcagaatgtgtttctttattcgaatcaattgataaactacaaattgatgacttaaaggag
gttttgaatgttcttaatgttggtgaactacgggaccttgtctgtagtcttaacaagtca
cataagaagatcacccagaattctgatcatggtactaggaagcaagattatgttgctcgg
gttcttggtgcatatgaaagtggtttatgccccaaccttccaagtatgattctagggaaa
actggaagttgtgtccggatatctgcatcagctgaatctgtcttttggcgtgccgagagg
ctattttttctgaatggagagcaagacctgtcggcatttttacttgtcgacttgggcatt
gtgaaatatcctgcttacaactgcatattcacagaccaaatttttccagacagaagtgac
ctattgtcttatgaggaggccattgaggttgcacaaggtatggatgagtctcttgacgag
aacaacaatgagttggtatcaagatgcattgagatttctgcctctcacgtatctagcttt
gtggaggaagatagatcatcagattctgggtcgatggctgcatttctatcttgcttttca
gccagttgggtctattctaaggtgatcctgttgggtgtttctttcctggagcatgaacgt
aggtataaagatgcaatcgatttgcttaagctgctgctagttaaatttaaatctgatcga
agaaggggatattggactctgaggctctcagttgatttggagcatgttgggtgccttgat
gagagtcttgaagtagctgaaaaggggttgctagatccttgggttcgtgctggctctata
gtggctctacagaggcgggttctgcggttggggaagccccctagacgatggaaaactccc
agtttttcggattccgtcaataggaagatagtggaggttcatgttcagggcagaccggtc
aactgcaaaacaggggtgaagaatgtcttttatggtgaggatggtaaacgttgtggagta
gaagagcttgctctagagtattatgctggagaaggaggatgctggcagggggttcacact
gagagtgggatttggttgactattttcgggctcctaatgtgggacgttgtatttgcggat
gtaccaaatgtcttccgcaccaaatttcagactgcacctttggatctggaaactgatagc
ttttatgaagtcagaaggggtcttgtagaagctcttctagataagattgagcatggcatg
gcggaagagttacttatcatgtcatgggaatcacacgtgggaacagcctgtaggggagtc
aactgggacaagcattccctttctgagctccgagcagctgttacatgcatcgggggtcct
tgtcttgcgtcaatctgtcggaatttggctcaagattacaggagctggtcgagtggaatg
cctgacttattgctgtggcgcttccatgacgactacagaggtgaagcaaagctcgttgaa
gtgaaaggccccagagacagactttcggaacaacaacgtgcatggctactctttttaatg
gactgtggcttcaatgttgaggtatgcaaagtgagtcatgccccaatatag
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