Lycium barbarum (goji berry): 132608795
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Entry
132608795 CDS
T09483
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132608795
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
132608795
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Peptidase_C24
NosD
Motif
Other DBs
NCBI-GeneID:
132608795
NCBI-ProteinID:
XP_060178524
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Position
9:complement(11514175..11519263)
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AA seq
450 aa
AA seq
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MAMGSLVSKKWLSFSLTFLLFVGVYAGVHSNGVGSDDSRTVEKEQLQSSENSTMAVSLEE
IEERLSKHAVDDPEEVVSMVAESIRNSTERRKLGYFSCGTGNPVDDCWRCDPNWQKNRKR
LADCGIGFGRNAIGGRDGRYYVVTDAGDDDPVNPRPGTIRHAVIQDEPLWIVFKRDMVIQ
LKQELIMNSFKTIDARGYNVHIANGACITIQYVTNIIIHGLHIHDCKPTGNAMVRSSPTH
FGFRTMADGDGVSIFGSSHIWVDHNSLSHCADGLVDAVMGSTAITISNNHFAHHNEVMLL
GHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTI
NSQGNRYLAPKNSFAKEVTKRVDTAAGQWKGWNWRSEGDLMLNGAYFTPSGAGASASYAR
ASSLGAKSSTMVGAITSSAGPLACRRSRTC
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgggttccttggtttcgaagaaatggctttcgtttagtttaacttttttgctt
tttgttggagtttatgccggtgttcacagtaacggcgttggttccgacgactccaggact
gtggaaaaagagcagttacagagctctgaaaactcaacaatggcagtgagtttggaagag
attgaggagagattaagtaaacatgcagtggatgatccagaagaagttgtctctatggtt
gcagagagcattaggaacagcacagagaggcgaaaacttggatatttctcatgtgggaca
ggaaatcctgttgatgactgctggagatgtgaccccaattggcaaaagaaccgtaaacgc
cttgctgattgtggcattggatttggtcgcaatgccattggtggccgtgatggtcgttac
tatgttgtcactgatgctggtgacgatgaccctgttaaccccaggcctggtaccattcgc
catgctgttatccaggatgaacctctatggattgtgttcaagcgcgatatggtcatacaa
ttgaaacaggagctcattatgaacagtttcaagaccattgatgcccgtggctacaatgtc
cacattgccaatggtgcttgtatcaccatccagtatgttaccaatattatcatccatggg
ctccacattcatgactgcaagccaactggaaatgccatggtgaggagctcaccgactcat
ttcggcttcaggaccatggctgatggtgatggtgtttctatctttgggtcaagccacatt
tgggttgatcataactcactatctcactgtgctgatggtcttgttgatgctgtcatgggc
tcaactgccattactatttccaacaatcatttcgcccatcataatgaggtcatgctattg
ggccacagtgactcttatactagagataagcagatgcaagtgacaattgcatacaaccac
tttggagagggtctcattcaaagaatgcctaggtgcagacatggctacttccatgtggtg
aacaatgactacactcactgggagatgtatgctattggtggaagtgctagcccaaccatt
aacagccaaggaaacagatacctcgccccaaaaaattcttttgcaaaggaggtaacaaaa
agggttgacacagcagcaggtcaatggaagggttggaactggagatcagagggagacttg
atgcttaatggtgcctatttcactccatcaggtgctggagcttcggcaagctatgcaaga
gcttcaagcttaggtgccaaatcctctacgatggtcggtgccataacttcaagtgctggt
ccccttgcttgccgcagaagccgcacttgctag
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