Lycium barbarum (goji berry): 132609242
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Entry
132609242 CDS
T09483
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132609242
Membrane trafficking [BR:
lbb04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
132609242
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
132609242
NCBI-ProteinID:
XP_060179102
LinkDB
All DBs
Position
9:105247440..105299252
Genome browser
AA seq
1829 aa
AA seq
DB search
METSSSGYRFRRIPHHSFAGSLNLDPLLDENLEQWPHLNELVQCYRTDWVKDENKYGHYE
SVSPPSFQSQIYECPDTDIETEMHLANARRPKIEDSIDGEIPSTSGTQHSEANFSDLSNA
KVSKHFGESPLPTYEPVFDWENERSLIFGQRIPEAHMSQYTSGLKIAVKVLSLSFQAGLA
EPFYGTICLYNRERREKLSEDFIFHVLPTEMQEASSSHERRCIFHLDAPSASICLLIQLE
KPATEEGGVSPSVYSRKEPVHLTEREKQKLQVWSRIMPYRESFSWAIIPLFDSNITSVGG
SASPSSPLAPSVSASSSQEGITEPLSKITADGKLGYSNGNSIVVEVSNLNKVKEGYTEES
LQDPKRKVHKPVKGVLKLEIEKLPASSAEAENALESGSLTYDSLDHGDHLTDATSMKCPT
NGSFEMKELVRNGSVAHENVENTADFEAFDFRTTTRNEPFLQLFHCLYVYPLTVSMSRKR
NMFIRVELRKDDTDIRKPHLEAMHPREPGVPLQKWSHTQVAVGARVASYHDEIKVSLPAI
WTPSHHLLFTFYHVDLQTKLEAPKPVVIGYASLPLSTHAQFRSEISLPIIKELVPHYLQE
SGKERLDYLEDGKNIFKLRLRLCSSLYPVSERIRDFFLEYDRHTLRTSPPWGSELLEAIN
SLKNVDSTALLQFLYPILNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVDEAERNAF
LVNFVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVK
SMALEQARSFYHNLPSGEDVPPMQLKEGVFRCVVQLYDCLLTEVHERCKKGLSLAKHLNS
SLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQTVLHDCKLTFLQIICDHDLFVEMPGR
DPSDRNYLSSILIQEIFLTWDHDDLSMRAKAARILVVLMCKHEFDIRYQKQEDKLYIAQL
YFPLVGQILDEMPVFYNLSTIEKREVLIIFLQIVRNLDDESLVKAWEQSIARTRLFFKLL
EECLMHFEHRKPADGMLVGSSSRSVIGDGPASPKYSDRLSPAINHYMSEAARQEVRGTPD
NGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASALALRESLHPILRQKLELWEENLS
AAVSLQVLEVSEKFSRTAVTKHIATDYGKLDCITSIFMNVFSRNQPLSFWKALVPVFNSV
FELHGATLMARENDRFLKQIAFHLLRLAVFRNDNIRKRAVIGLQILIRSSFSYFMQTGRL
RVMLTITLSELMSEVQVTQMKPDGTLEESGEARRLRNSLEEMVDEAKSSSLLVESGLPEN
ALVAVPEGLAENRWSWSEVKFLSESLLMALDASLEHALLGSVMNLDRYAAAESFYKLAMA
FSPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVCRNDGVWSKDHVSALR
KICPMVSSDITSEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELFHFCASILELVI
PVYKSRKAYGQLAKCHTMLTNIYESILEQESSPIPFTDATYYRVGFYGEKFGKLDRKEYV
YREPRDVRLGDIMEKLSHVYESRMDGTTLHVIPDSRQVKADELQPGVCYLQITAVDPVME
DEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEGSFP
ALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRILQG
SVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEED
QDFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttcatctagtggatatcgatttcggagaataccacaccactccttcgctggt
tctttgaatttagatccgctgcttgatgaaaatttggagcagtggccacatttaaatgaa
cttgtgcaatgctaccgaaccgactgggtaaaagatgagaacaagtatggtcactatgaa
agcgtcagccccccttcatttcagagtcagatatatgagtgtcctgatactgatattgaa
acagagatgcatcttgcaaatgctaggcgacctaagattgaggattcaattgatggtgaa
atccccagcacttcggggacacaacactctgaagctaatttctctgacctctcaaatgcc
aaagtctcgaagcattttggcgaatcccctctaccaacgtatgaaccagtttttgactgg
gaaaatgaaaggtcattaatatttgggcaaaggattccagaagctcatatgtcccagtat
acgagcggtctgaagattgccgtgaaagtcctatcattgtcatttcaagctggactagct
gagccgttttatggcacaatttgtttatataatagggagcgaagagaaaaactttcagag
gattttattttccatgtattgcctaccgaaatgcaagaggcaagcagctcccatgaaagg
cgttgtatttttcatcttgatgctccatcagcatctatttgtctgctaatccaactagaa
aaacctgccactgaagaaggcggagtgtctccctctgtttattcacgaaaggaaccagtt
catctgacagagagagagaaacagaaactacaagtatggtcgcggatcatgccttatagg
gagtccttttcctgggccatcattccactctttgatagtaacataacttctgtgggtggt
tctgcttctcccagcagtcctcttgctccaagcgtctctgcttcaagttctcaagagggt
attactgagccactttcaaaaattacagcagatggaaagcttggttattcaaatggaaac
tccattgtggttgaagtgtctaacttaaacaaagtcaaagaaggatacaccgaggaatcg
ctccaggatccaaagagaaaggttcataaaccagtaaaaggtgtcttgaaattggaaatc
gaaaagctgccagctagctctgctgaagctgaaaatgctttggagagtgggagtctgacc
tatgattctcttgatcatggtgatcatttgactgatgcgacttctatgaaatgccctact
aatggttcctttgagatgaaagagcttgttcggaatggttcagttgctcatgaaaatgtg
gaaaatactgctgattttgaagcttttgacttccgcacaacgacaaggaatgaaccgttc
ttgcagctctttcactgcttatatgtctaccccttgactgttagtatgagtcgaaaaaga
aacatgtttatacgtgttgaactgagaaaggacgacacagatattcgaaaaccacatcta
gaggctatgcatccaagggaaccaggtgtaccacttcagaaatggtctcacactcaagtt
gctgttggggcaagggtggccagctaccatgatgagatcaaagtttctttgcctgctatt
tggacaccatcacatcaccttttgtttactttctatcatgttgatcttcaaacaaaactt
gaagcaccaaagccagtggtaattggatacgcttcacttccattatcgacacatgcacag
ttcagatctgagatatccttgccaatcatcaaagaattggttcctcattaccttcaagaa
agtggcaaggagaggctggattacttggaagatggaaagaatatcttcaagcttcgttta
cgactatgctcatcattatacccagttagtgagcgcattagggattttttcctcgagtat
gataggcatactctacggactagccccccttggggatctgagcttcttgaggcaattaat
agtttgaagaatgttgattccactgctttgcttcaattcctttatccaattttaaacatg
cttctccatcttattggcaacgggggagaaactcttcaggttgctgcctttagagctatg
gttaacattttaacaagggtgcagcaagagtcggttgatgaagctgagagaaatgctttc
ctagttaactttgttgattatgcttttgatgattttgggggccgccagccaccagtctat
cctggtttatccacagtgtggggaagtttggctcgcagtaaggcaaaaggctaccgtgtt
gggccagtctatgatgatgtcctggcaatggcttggttttttcttgagctaattgtaaag
tcaatggcactggagcaggctcgatctttctatcacaatcttccatcgggtgaagatgtc
ccaccaatgcaattgaaagaaggtgtttttagatgtgttgttcaattgtatgattgcctt
ttaacagaagttcatgaacgctgcaagaaaggtctaagcttggccaagcatttaaatagt
agcttggctttcttttgttatgatcttttatccatcatcgagcctcgtcaggtttttgaa
ctggtgtccttgtacctcgataaattctctggagtgtgtcaaacggtgctgcatgactgc
aagcttacctttctacaaattatatgcgaccatgatctttttgtcgaaatgcctggacga
gatccttctgataggaactatctttcatctatcttaattcaagaaattttccttacatgg
gatcatgatgacttgtcaatgagggcaaaagctgcaagaatcttggtggtcctcatgtgt
aagcacgagtttgatattcgctatcaaaagcaagaggataaattatatattgctcaatta
tattttccccttgttggccagatcctggatgagatgcctgtcttttacaatctaagtaca
attgaaaagcgtgaagtcttgattatctttctgcaaatagtgcgcaacttggacgatgaa
tcacttgttaaagcttgggagcagagcattgcccgaaccagattatttttcaaactcttg
gaagagtgcttgatgcattttgagcataggaaacctgctgatggcatgcttgttggtagt
agttctcgtagcgtgataggagatggacctgcatccccgaaatattctgacagactttca
cctgcaattaatcactatatgtctgaggcagcaaggcaagaagtcagaggaacgccggat
aatggttatttgtggcagagggtcaactcccaattaagctcgcctagtcagccatattct
ttgagagaagcgctagctcaagcccaatcctccagaattggagcttcagcactagcatta
agggaatcgttgcacccaatcttaaggcaaaagctggaactttgggaagagaacctgagt
gctgctgttagtcttcaagttttagaagtttctgagaagttctcgcggactgctgtaacg
aagcatattgctactgattatggaaaacttgactgtatcacatccatatttatgaatgtg
ttctcacgaaatcaaccactctccttctggaaagctctcgttcctgtcttcaacagtgtc
tttgaacttcatggagcgacactgatggcaagagagaacgatcgtttcttaaagcaaatt
gctttccaccttcttcgtcttgcagtgtttcggaatgacaatatcaggaaaagggctgta
attgggctgcagatacttattcggagctcgttctcttattttatgcagacgggaagacta
agagtcatgctaactattacattgtcagagttaatgtctgaagttcaagtaacacaaatg
aaacctgatggaactctagaagaaagtggtgaagctcgtcgtcttcggaattctttggag
gaaatggtagatgaagctaagagttcctccttattagtagagtctgggctcccagaaaat
gcactggttgctgttcccgaaggattggcagaaaaccgctggtcctggtctgaggtgaaa
tttctttctgagagtcttcttatggctcttgatgccagcctggaacatgcacttctgggc
tctgttatgaatcttgacaggtatgcagctgcagagagcttttataaactagcgatggca
ttttctcctgtaccagatcttcacataatgtggttactgcatctttgtgatgctcatcag
gaaatgcagtcttgggctgaagctgctcaatgcgctgttgctgttgctggtgtagtgatg
caggcccttgtgtgtaggaatgatggtgtctggagcaaggatcatgtgagtgcattacgc
aaaatatgccccatggtcagcagtgacatcacttctgaggcttcagcagctgaggtggag
ggatatggtgcttcaaaactcacagttgactcggctgtgaagtatttacaacttgcaaat
aagcttttctctcaggctgagttgttccatttctgtgcaagcattctagaacttgtaatc
ccagtatataaaagcaggaaggcgtatggacagcttgcgaaatgccacacaatgcttact
aatatctatgaatccatccttgagcaggagtcaagccctatacctttcacagacgccaca
tattatagagtaggattttacggtgagaagtttgggaagctggacaggaaagaatatgtt
tatagggagcctcgtgatgtgcgattaggtgacataatggagaagttgagccatgtctac
gaatcgagaatggatggaactacattacacgtaattcctgattcgagacaagtcaaagca
gatgaattgcagcctggagtctgctacctgcaaataactgcagttgatcccgtaatggag
gatgaagatttaggaagcagaagagaaaggatattctctctctctacaggaagtgtccgt
gctcgagtctttgatcggtttttgttcgatacccctttcactaaaaatggaaagacccag
ggaggcttggaagaccaatggaagcggcgaacggttctgcaaactgagggttcttttcct
gcgctagtgaatcgactcttggttatcaaatcagaatcacttgagttctccccagttgag
aacgcaattggaatgattgaaactaggacagctgcattaaggaatgaacttgaagagcct
cgaagctcagaaggcgatcaactcccccgtttgcagagtttacagaggattcttcaaggc
tcagttgcagttcaagttaatagtggagtcctcagtgtctgcacagctttcctttctggt
gagccggccactaggttacgttcgcaggagctacaacaacttattgctgctcttcttgag
tttatggctgtgtgtaaacgtgctattcgagtacactttaggttgattggggaagaagat
caggattttcatactcaacttgtaaatggtttccagtctctcactgcagaactatcacat
tatattcctgcaattctttcagagctttaa
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integrated database retrieval system
