Lycium barbarum (goji berry): 132609293
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Entry
132609293 CDS
T09483
Name
(RefSeq) protein SLOW WALKER 1
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132609293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbb03009
]
132609293
Ribosome biogenesis [BR:
lbb03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
132609293
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_DCAF4
Utp13
Motif
Other DBs
NCBI-GeneID:
132609293
NCBI-ProteinID:
XP_060179178
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Position
9:complement(19052181..19054265)
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AA seq
533 aa
AA seq
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MAENQSSIARTFPVKPKLKPTSSNSTTPTPESKYWKSFKLPKDTQTQTLVSSINSISFSP
TSPHDFAATHSATVSIFSAQTLEPKTTISSAFKDTVTTASFRSDGRLVAAGDLSGAVQVL
DIKTRVPLRRLRGHTRPVRVVRYPRSDKLHLFSGGDDAIVKYWDIASECKICDLLGHKDY
VRCGDVSPVSDDMFVSGSYDHTVKVWDVRVLNSGCVMEFDHGKPVEDVIYLPSGGLVATA
GGNSVKIWDVLGGGKLLYTMEGHNKTVTSICVGKIGKDSGEEAQQYRILSVGLDGYMKVF
DYGKFKVTHSMRFPNPLMSVGFSPDCSTRVIGASNGTLYIGKRKVKDSESTELVDFGGFR
SVEEPRSRVLRPSYFRYFQRGQSEKPSEWDYLIKKPKKIKVAEHDKLLKKFMHKEALLAA
LNGKNPENVVAVMEELVARKKLLRCVSNLETEELGLLLRFLQRNSTMPRFARFLMGLTKK
VVEMRAEDIKSSDELRGHIRNLKRDVEEEIRVQQTLQQIQGIVSPLLKIAARR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatcaatcatcaatagcaagaacattcccagtaaagccaaaactcaaaccc
acttcatcaaattccactaccccaacacccgaatccaaatactggaaatccttcaaactt
cctaaagacacccaaacccaaacattggtttcatccatcaactccatctccttctcccca
acatcccctcacgatttcgccgccacacattccgccaccgtgtcaattttctcagcacaa
accctagaacccaaaacgacaatctcatctgcgtttaaagacaccgtaaccaccgcttct
ttccgttctgacggtcgtttagtcgcagccggtgatctttccggtgcggttcaagttctt
gatatcaagacgcgtgtcccactccgtcgcttacgtggacatacccgacccgttcgggtt
gtccgttacccgcgctccgataagctccacctcttctcaggtggtgatgatgctattgtt
aagtattgggatattgctagtgagtgtaaaatttgtgatcttttaggacataaagattat
gtgagatgtggagatgtttcgcctgttagcgatgatatgtttgtttcggggagttatgat
catacggttaaggtttgggatgttagggtgttgaattcgggttgtgtgatggagtttgat
catgggaagcctgttgaggatgtcatttatttgccgtctggtgggttagttgcgacggct
ggtgggaattccgtgaagatttgggatgttttaggaggtgggaaattgttgtatacgatg
gaggggcacaacaagactgttacgtcgatttgtgttggtaaaattgggaaggatagtggt
gaggaagcgcaacaatatcggattttgagtgtggggttggatggatatatgaaggttttc
gattatgggaagtttaaggttactcattctatgaggtttccgaatccgttaatgtctgtt
gggttttcgcctgattgttctacgagggtgattggggcgtcgaatgggacgttgtatatt
ggtaagagaaaggtgaaggatagtgagagcacggaacttgtggattttggtggttttcgt
tcggttgaggagcctcggagtagggtgctgaggccatcttattttaggtattttcagcgg
gggcaaagtgagaagccatccgaatgggattacttgattaagaagcctaagaagataaag
gtggctgagcatgataagctgttgaagaaatttatgcataaggaggctttgttagctgct
ttgaatgggaagaaccccgaaaatgtggttgctgttatggaggaattggttgctaggaag
aagttgttgagatgtgtgtcgaacttggaaactgaagaacttggtttgcttctaaggttt
ctgcagaggaattcgaccatgcctagatttgcaaggtttctgatgggattgacaaagaaa
gttgttgagatgcgagctgaagatattaaatcatcagatgaactgagaggtcacattaga
aatcttaaacgagatgtcgaggaggaaataagagtgcaacagacattgcaacagatacag
ggaattgtttctcctctgctcaagattgctgcaaggagatga
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