Lycium barbarum (goji berry): 132609310
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Entry
132609310 CDS
T09483
Name
(RefSeq) RNA-binding protein BRN1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbb03041
]
132609310
Spliceosome [BR:
lbb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
132609310
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
RRM_occluded
GHMP_kinases_C
PPP1R35_C
Motif
Other DBs
NCBI-GeneID:
132609310
NCBI-ProteinID:
XP_060179207
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All DBs
Position
9:19022320..19028989
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AA seq
430 aa
AA seq
DB search
MAELQKDSEEAERVKLFVGQVPKHMTEPQLLDFFKDFAIVDEVNLIKDKTTRASRGCCFV
ICPSREEADKAVNACHNKMTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSDAEVSA
LFSQYGVIKDLQILRGSQQTSKGCAFLKYEKKEQAVAAIEALNGKHKMEGATVPLVVKWA
DTEKERQARRAQKSLSQASDSRQHPSLFGALPMGYMPPYNGYGYQTPGAYGLMQYRLPSM
QNQPGFQNIVPPINQASSLRGGAPDLSPGISPRNYAMSPGSYVGSAYPAVPGIQYPMPYT
GGVMNTRPPSGSSGSIPPSTVNSHSAASSSVGSSTGGQVEGPPGANLFIYHIPQEFGDQE
LADEFQPFGRVLSAKVFVDKATGVSKCFGFVSYDSPAAAQTAISRMNGRQLGSKKLKVQL
KRDNKQNKHY
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcggagttgcagaaggatagcgaagaggctgaaagagtgaagttattcgtaggtcaa
gtacccaaacacatgactgaaccacaactactcgacttctttaaagactttgctatcgtt
gacgaagtcaacctcatcaaagacaaaactactcgtgcttctcgaggatgttgttttgtg
atctgtccatctagagaagaagcggataaggctgttaatgcatgtcacaacaagatgacg
cttcccggtgcttccagtccgctgcaagtgaagtatgctgatggcgaattggaaagacta
gagcacaagctttttgttgggatgcttccaaagaatgtttctgacgctgaagtatctgcg
ttgttctcccaatatggagtcattaaagatttgcagattctcagaggttctcagcaaact
agtaaaggatgtgcttttttgaagtatgagaaaaaagaacaagcagttgcagcaatagag
gccctcaatggaaagcataagatggagggtgctactgtccctttggtagtcaaatgggca
gatactgaaaaggaaaggcaagcccggagggctcagaaatctctatctcaagcttctgac
tctagacagcatccttctttgtttggagccctaccaatgggttacatgccaccatacaat
ggctacggttatcagactcctggggcatatgggctcatgcagtatcgcctaccatcaatg
cagaatcagcccggatttcagaatatagttccaccaataaaccaagcaagttctctacgt
ggaggtgcaccagatctttcacctggaattagcccaagaaattatgccatgtcacctgga
agttatgttggatccgcttaccctgctgttccagggattcagtatccaatgccatatact
ggaggcgttatgaacaccagaccaccaagtggttcttccggttcgatcccccctagtact
gtaaacagtcattctgcagcatcttcaagtgtcggttcaagtacagggggccaggttgaa
ggtccacctggtgctaatctatttatttaccatattcctcaagaatttggtgatcaagag
cttgcagatgaatttcagccttttggtagggtcttgagtgcgaaggtgtttgttgacaaa
gctactggtgttagcaaatgttttggatttgtaagttatgattctccagcagctgcacaa
actgcaatcagtaggatgaatggtcgccaattaggtagtaagaagttgaaggttcagctt
aaaagggacaacaaacagaataaacattattga
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