Lycium barbarum (goji berry): 132609729
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Entry
132609729 CDS
T09483
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 21-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lbb01002
]
132609729
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132609729
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132609729
Peptidases and inhibitors [BR:
lbb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132609729
Ubiquitin system [BR:
lbb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132609729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF7351
Motif
Other DBs
NCBI-GeneID:
132609729
NCBI-ProteinID:
XP_060179842
LinkDB
All DBs
Position
9:complement(121141458..121149376)
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AA seq
700 aa
AA seq
DB search
METHNLKTQSLPVNSVGQAQQSDENGKDVDFLVKEDSRRVENKDSRRVENEDLGLDLSPV
RANSCNWGNSWTKITDSSPLESQWYVGVDNNGPSSSDWAQWPSEIKPMGSIEPKWSFQRD
EEIEPVTTIVPFENQPFKLGAGLANLGNTCFLNAVLQSFMHTVPLLHLLASNDHASPCDS
YMIGFCVICVIRELIDLSFASGGGFVSPWKLVNNLSYFSSSFHRFQQEDAHEFLQCLLDR
LESCCNDSMRKDRAPSESDNIVKHAFGGRLVSKLRCCNCGHCSDTYEPLIDLSLEIKDVD
SLPAALESFTKVEKIDDPEIKFSCEKCKAQVSIEKQLLLDKAPSVAAFHLKRFENDGSFV
EKVDKHVSFPLELDLLPYTDNNQINNEEMKYDLYAVIVHIGFSSCSGHYYSYVRSAPDEW
YKFDDSEVFRVHEDLVLEEEAYIMFYAKRGTPWFSDFVEMQKPFIDPTIFNTSPKSVLDN
VDAISITSPCILNNHASDVSESDHAADEASTKPELDKIEDSESRDVEPTSTPGPTGAVNS
LDYQTAEADTVSLASKHNVNNCTRDIGVTGRMETLTSKTRSRSPSRERHRDDPPENSYAI
PRGHATLADQVSCKHQSQKDLEQDLERKEACSLIKKTIPGSRGQQLMAAMRGSQCEGSFL
NKKRRKIEGSPSSRDDRSSAGRRRSSFGSGLHPVMASSFR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccataacctaaaaactcaatctttaccagttaattcagttggtcaagctcaa
caaagtgatgaaaatggaaaagatgttgactttttagtcaaagaagattctagaagagtt
gaaaataaagattctagaagagttgaaaatgaagatttgggtttggatttgtcaccagtt
agggctaattcttgtaattggggcaattcttggactaaaattactgattctagcccattg
gaatcacaatggtatgttggtgttgataataatgggccttcttcttcagattgggcccaa
tggccttcagaaattaagcccatgggttcaattgagcccaaatggagttttcaaagagat
gaagaaattgagcctgtaaccactattgtgccatttgaaaatcagccttttaagctgggt
gctggacttgctaatttaggcaacacatgcttcctgaatgcggttttgcaatctttcatg
cacacggtgcctttgcttcacctcctcgcgtcgaacgatcatgcatcgccatgtgatagt
tacatgataggattctgtgtaatttgcgttattagagagcttattgacctttcatttgct
tctggcggcggttttgtctctccctggaaacttgttaacaacttgagttatttttcgtcc
agtttccataggttccaacaagaagacgctcatgaattcctacaatgccttctggataga
cttgaaagctgttgcaatgattcaatgcgaaaagatagggcaccttcagaaagtgacaac
attgtgaagcatgcctttggtggtcgccttgtcagcaaactgcgctgttgcaattgtggt
cactgctctgacacttacgagcctctaattgacctaagtttggagattaaagatgtcgac
agtttacccgcagcgttggaatctttcacaaaagttgagaaaattgatgatccagagata
aagttttcatgtgaaaaatgtaaggcacaagtgtcaatcgagaagcagcttttgctcgat
aaggccccttctgttgctgccttccatttgaagagatttgaaaatgacggttcttttgtt
gagaaggttgacaaacatgtttcatttccgctggaattggacttgcttccgtatactgat
aacaaccaaattaataatgaagaaatgaagtacgatctttatgcagttatagtgcatatt
gggttttcatcctgttcagggcactattacagctacgtccggtctgcaccagatgaatgg
tacaaatttgatgactcagaggtcttccgggttcacgaagatctagttttggaagaggaa
gcatatataatgttttatgcaaagagaggtaccccatggttctcagatttcgttgaaatg
caaaagcccttcatagatccgaccatattcaatacttctcccaagtcagttctggataat
gtggacgctatctccataacttctccgtgcattctaaataatcatgcttccgatgtcagc
gaatccgatcacgctgcagacgaagcatctactaagcctgagctcgacaagattgaggat
agtgaatcacgggacgttgagccgacgtctactccaggaccaactggtgcggttaactct
ctcgattaccaaactgctgaagcggatacagtttctttagcttcaaagcataatgtaaac
aactgtactcgggacattggtgtgaccggaagaatggaaactctgacttccaagacacga
tctagatctcctagtcgagagaggcaccgagatgatccacccgaaaacagttatgccatt
cctcgtggccatgcaacattagcagatcaagtttcttgcaaacatcaatcacagaaggat
ctagagcaggacttggaaagaaaggaggcgtgttctctaattaagaaaactattcccggg
tcaagaggtcaacaactaatggctgctatgcgcggctcacaatgtgaaggttcatttttg
aacaagaaaaggagaaaaatcgaaggttctccaagtagtagagacgatagaagttcagct
ggtcgacgtaggtcaagttttggctctggtttacatcctgtaatggctagcagcttcaga
tga
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