Lycium barbarum (goji berry): 132609801
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Entry
132609801 CDS
T09483
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lbb03036
]
132609801
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Meiosis-specific proteins
Others
132609801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Apolipo_F
AAA_27
Motif
Other DBs
NCBI-GeneID:
132609801
NCBI-ProteinID:
XP_060179941
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Position
9:complement(122662031..122675562)
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AA seq
793 aa
AA seq
DB search
MEEDNGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLQFYEPM
VIIVSPNKLAADGMVGVSQLADRVCSSTRKVIMARGCFDDTRGAVLVKGLAAKGPSALGL
DSYYKQYYLCLAAAAATIKWVEAEKGVIITNHSLLVTFNGSFDHMNIDSTSVQNLEIIEP
MHSSLLGTNSKKRSLFHMLKTTRTIGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ
LFFGLSQALRKFPKETDRVLCHFCFKPKRVTNEVLTSDNGRRSQIMISSVILLKTALDAL
PLLSKVLKEAKSCLLGNVYKTICENEKYTSIRKRIGEVIDEDVLHTRVPFVARTQQCFAV
KAGADGLLDMARRSFCDTSEAIHNLANKYRQDFHLPNLKIPFNNRQGFYFSIPQKDIQGK
LPSKFIQVVKHGNNVHCSSLELASLNVRNKSAAKECWLRTALCLEALMDAIREDVSVLTV
LSEVLCLLDMMVNSFAHMISTKPVDRYTRARFTCDGPLAIDSGRHPILEGIHNDFIPNGI
FLSEASNMAIVMGPNMSGKSTYLQQVCLMVILAQIGCYIPARFATLRVVDRIFTRMGTMD
SLESNSSTFMMEMKETAFIMQNISHRSLIVMDELGRATSSSDGFAIAWSCCEHLLALKAY
SIFATHMENLSALSTMYPNVKILHFDVDVRNNRMDFKFQLKDGSRHVPHYGLMLAGVAGL
PSSVVETAKRITSRITEKEMKRMELNCRQYEDVKLTYRVAQRLMCLKYSDQDEDSLREAL
QSLKESCIGGRLR
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggataacggagaaagatcaagcttcgtcatcggcctcattgaaaaccgtgcc
aaagaggttggagtagctgcgtttgatttgagatcagcatcactgcatctttctcagtat
atagagactagcagctcctatcaaaatacgaagactttactgcagttctatgaacctatg
gtgatcattgtttccccaaataaactagcggcggatggtatggtcggagtctcacaacta
gctgacagagtttgttcctccacaagaaaggttataatggctcgtggttgctttgacgat
accaggggagctgtactggttaaaggtttagctgctaagggaccgtccgctcttggtctg
gactcatactacaagcaatactatttgtgcttggctgcagcagctgcaactatcaagtgg
gtcgaagcagagaaaggtgttattataacaaatcactcattgctggttactttcaatgga
tcttttgaccacatgaacattgattccaccagtgttcagaacttggagataattgagcct
atgcactcttctctattgggcacaaacagcaaaaagagaagtttattccacatgcttaaa
acaactcgaactattggagggactagacttctgagggcaaatcttttgcagcctcttaaa
gacatagagacaattaacactcgactcgattgcctggatgagttgatgagcaatgagcag
ctattctttggcttgtctcaagcccttcgtaagtttccgaaagaaacagatagggtcctt
tgtcacttctgcttcaagccaaagagagttaccaatgaagtcttgacttcggataatgga
agaaggagccaaattatgatatccagcgttattcttctcaaaacagctcttgatgcttta
ccgttactctccaaggtgcttaaagaagccaagagttgtctgcttggaaatgtttacaag
accatatgtgagaatgaaaaatatacttcaataaggaaaagaattggagaggtgattgat
gaagatgtccttcatacacgagttccttttgttgcacggacacaacagtgttttgctgtt
aaggctggagctgatgggcttctggacatggctcggagatcattttgtgataccagcgaa
gctatacacaatctcgcaaataagtatcgtcaagatttccatctgccgaacttgaagatc
ccattcaataacaggcaagggttttactttagcattccacagaaggacatacagggaaaa
ctgcctagcaagttcatccaggtcgtgaaacatggaaacaatgtccattgctcgagtctt
gaacttgcttcattgaatgtgaggaacaagtctgcagctaaagaatgctggttgaggact
gcactttgcctggaagcattaatggatgcaatacgagaggatgtttctgtgcttactgtt
ctttcagaagtgttgtgccttttagacatgatggtaaattcatttgctcacatgatatca
acaaaaccagttgatagatatactagagctcgttttacatgtgatggcccattggcaata
gattctggacggcaccccattctggaaggcatacacaatgatttcattccaaatggcatc
tttctttctgaagcatcaaatatggctattgtaatgggcccaaacatgagcggaaaaagt
acttatcttcagcaagtttgtttaatggtcatccttgctcaaattggttgctatattcct
gctcgatttgccactttgagggtggtcgatcgtatttttacaaggatgggaacaatggat
agtctcgaatcaaactctagcacgttcatgatggagatgaaagagacagcttttataatg
caaaacatttcccatagaagtctgattgttatggatgaattggggagggcgacttcatcc
tctgatgggttcgcaatcgcatggagctgttgtgagcatctattggcacttaaagcgtac
tcaatatttgctactcacatggaaaatctgtcagcgctatccaccatgtatccaaatgtg
aaaattcttcattttgatgttgacgtgaggaataaccgcatggacttcaagtttcaactg
aaagatgggtcacgtcatgtgccacactacggcctcatgttagctggggtagctggatta
ccaagttcagtggtggaaaccgccaaaagaatcacatctaggatcacagagaaggaaatg
aagagaatggagctgaattgcagacagtatgaggacgtaaaattgacttaccgtgtggct
caacggctgatgtgcttgaaatattctgatcaggatgaagattctttaagggaggctctg
cagagccttaaggaaagctgtattggtggaaggcttagataa
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