Lycium barbarum (goji berry): 132610042
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Entry
132610042 CDS
T09483
Name
(RefSeq) receptor-like kinase TMK4
KO
K00924
receptor protein kinase TMK [EC:
2.7.11.1
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
132610042
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lbb01001
]
132610042
Enzymes [BR:
lbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
132610042
Protein kinases [BR:
lbb01001
]
Serine/threonine kinases: TKL group
IRAK family
132610042
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_8
LRR_4
LRR_1
LRRNT_2
LRR_14
ABC1
CR_prot_dom_plant
Protocadherin
DUF4690
APH
DAG1
RAMP
TMEM51
TMEM154
Syndecan
SKG6
Motif
Other DBs
NCBI-GeneID:
132610042
NCBI-ProteinID:
XP_060180279
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All DBs
Position
9:20884911..20888690
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AA seq
934 aa
AA seq
DB search
MGKKKYKFYEKIITCYLLFFLLITNASANVLSDVKVSAVVRDGSGDDASIMAKLAKSLIP
TPPGWSGNNVCKWPGVSCDSSGRVDSISLIGKSLGGQLPPDLNQLANLQSLNLQKNRLSG
SLPSLSGLANIQDVHLDSNNFTSVPPDFLKGLTNLQHFSIDENPSLPPWTIPDSLTDSPS
LTDFSASNANIIGQIPDFFGSLPSLENLRLSYNNITGFLPSSFAKSGIQNLVLNNQKFGL
SGRIDILGSMEQLIQVWIHVNKFSGPIPDLSGCSNLIDLQLRDNSLTGAIPPSLTSLPKL
ANVSLQNNIFLGPMPGFKPNVQVSLGNTNHFCNPGPGPCDPQVTILIEIAGAVGCPTAIA
ESWSGNNPCKDWNYITCDPKGSVTVINFAKQNWVGTISPATANLTGLKQLIMSDNNLTGP
IPDSLTSLADLVLVDISNNNISGKVPKFRSDVIVKTSGNPFIGKDVPLSPPPGRSSTPSS
SGGRDNLSPSAAKDEHKSSVSTGVIVAIVIAAVFVILVILCLVIYKYKRNGKKSKLSRGK
EQKSKNGSPKNVNGYGAIPSTASQSSAANSEIYVYEGGHVTIPVELLREATDNFNEENIL
GRGGFGIVYKGKLHDGTEIAVKRMEATIASNKGLNEFRAEIEVLTKVRHRHLVALHGFCV
NGNERLLVYEYMPQGTLGQHLFEHDRLGFLPLTWKQRLIIALDVARGVEYLHGLAQQSFI
HRDLKPSNVLLDDDMRAKVSDFGLVKSAPDGKYSVETRLAGTFGYLAPEYASTGRVTTKI
DVFAFGVILMEILTGRKALDENLPEDRSHLVPWFKKMVVNKEKILEVLDPTLDPDEETYQ
SICKVAELAGHCTAREPSQRPDMGHAVNVLAPLVEQWTPSAATGDGSFNIDFNMSLPQAL
QRWRANDDSMLSEDTYGDYTKRDKSTSSYTKEHQ
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaaaaagtacaaattctatgaaaaaataatcacatgctacctcctcttcttc
ctcctcataaccaatgcctccgctaacgttttatccgacgttaaggtgtctgccgttgta
cgtgatggttcgggtgatgatgcatccatcatggctaaattggctaagtctctaataccc
acacctcctggttggtcaggtaacaatgtatgtaaatggccaggtgtgtcatgtgactct
tcaggcagggttgattctattagtcttataggaaaatctttaggaggtcaattaccacca
gatcttaatcaacttgctaatcttcaatctcttaatctacaaaagaatcgtctttccggt
tctttaccttctttatcaggccttgctaatattcaggatgttcatcttgattccaataat
tttacatccgttcctcctgattttcttaaagggttaacgaatttacagcattttagcatt
gatgaaaatcctagtcttcctccatggacgattcctgatagtttaacagattcaccatcc
ttgactgatttttcagcgtctaatgctaatattattggtcagattccggacttttttggg
tcgttacctagtttggagaatcttaggctttcgtataataatataacggggttcttgcca
tcgagttttgctaagtctgggatccaaaacttggtgcttaataatcaaaagtttgggctt
tcaggcaggattgatattcttggttctatggaacagttaattcaggtttggatccatgtt
aataagttttcagggccaattcctgatctttctggttgtagtaatttgatcgatcttcag
cttcgtgataatagcttaactggagcgattcctccttctctaacttcacttcctaagctg
gctaacgtgtctttgcaaaataacatatttttaggaccaatgccagggttcaaaccaaat
gtccaagtgagtcttggtaacacaaatcatttttgtaatcctggtccaggaccgtgtgat
ccacaagtaactatattgattgagattgctggagcagtgggttgtccgacggcaattgcc
gagtcttggtcagggaataatccttgtaaagattggaactatattacatgtgatcctaaa
ggcagtgtcactgtaatcaattttgcaaaacagaattgggttggtactatatctcctgca
actgctaatctcaccggtttgaaacaattgatcatgagtgataataatctcactggtcca
attccagatagcctgacgagtttagcagacctggtgcttgtcgatatttccaacaacaac
atttctgggaaggtcccaaaatttcgttcggatgtcatagtgaaaacgtctggtaatccg
tttatagggaaagatgtgcccctaagtcctccacctggaagatcaagtactccaagttcg
tctggtgggagagataatttatcaccttctgctgcaaaagacgaacataaatcttccgtc
tctacaggggtcattgttgctattgttattgctgctgttttcgtaatcctagtaattttg
tgcttggtgatatataaatacaagcgtaacgggaaaaaatcaaaattgagcagaggcaag
gagcaaaaatcgaagaatggttcccctaaaaatgtgaatggttatggtgcaattccaagc
acggctagtcaaagtagtgcagcaaacagcgaaatctatgtatatgaaggtgggcatgta
accatcccggtggaacttctgcgagaggcgacagacaatttcaatgaagaaaatatattg
ggacgtggcgggtttggcatcgtttacaaaggtaaactccatgatgggacagagattgct
gtgaagagaatggaagctactatagcaagtaacaaaggcctgaacgagttcagagctgaa
attgaagtactcacaaaggttagacacagacacttagtggcacttcatggattttgtgtc
aatggaaatgagaggcttttagtttacgagtacatgccacaagggacattaggccagcat
ttgttcgagcatgatcgattgggatttctacctcttacttggaagcaaagattaataata
gcactagatgttgccagaggagtagagtatctgcatggtttggcacaacaaagcttcata
catagagatctaaagccttctaacgtacttcttgatgatgacatgagggctaaggtctct
gattttggattagttaaaagtgcacctgatgggaagtattccgtggaaacaaggctggca
ggaacttttgggtatcttgctccagagtatgcttccactggaagagttaccacgaaaatt
gacgtcttcgcctttggagtgatcttgatggagatactcactggcagaaaagcacttgat
gagaacttaccagaagacagaagtcatttagtcccctggtttaaaaaaatggttgtcaac
aaagagaagattctagaagttctagacccgaccctggatccggacgaggaaacttaccag
agcatttgcaaagtagcagagctagcaggacattgcacggctagggaaccatcacagaga
ccagatatgggacacgcagtaaatgtcttagctcctcttgtagagcaatggactccctct
gctgctactggtgatggtagtttcaatattgatttcaatatgagtcttcctcaagccctg
caaagatggagagctaacgatgattccatgctttctgaagacacatatggtgactataca
aagcgagacaaaagcacatctagttatacaaaggaacaccagtga
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