Lycium barbarum (goji berry): 132610108
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Entry
132610108 CDS
T09483
Name
(RefSeq) protein argonaute 10-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132610108
03036 Chromosome and associated proteins [BR:
lbb03036
]
132610108
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132610108
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
132610108
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
132610108
microRNA pathway
RISC loading complex
132610108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF3577
Motif
Other DBs
NCBI-GeneID:
132610108
NCBI-ProteinID:
XP_060180353
LinkDB
All DBs
Position
9:12771956..12779896
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AA seq
983 aa
AA seq
DB search
MPLRQMKEGSEQHIVIKPQVQNTMNQVQKNPKTSQNGKGPPTQESQNNKIHNQTSPPSRN
RGRRRGRGGRKSDQSETFMRPSSRPCTAASKPVIAEVAPSVEATNVSIIENNGSSSGFPS
SSKSLCFAPRPGYGQLGTKCIVKANHFLAELPNKDLNQYDVTVTPEVSSRNVNRAIMAEL
VKLYKESDLGMRLPAYDGRKSLYTAGELPFKWKEFTIKLIDEDDVINGPKRQREYKVVIK
FVARANLHHLSQFLAGKRADGPQEALQILDIVLRELSIKRYCPVGRSFFSPDIRKPQPLG
DGLEAWCGFYQSIRPTQMGLSLNIDMASAAFIEALPVIEFVAQLLGKDVSSRPLSDSDRV
KIKKALRGVKVEVTHRGNVRRKYRVSGLTAQPTRELVFPVDDNLTMKSVVEYFQEMYGFT
IKYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLSEKQITALLKVTCQRPRDRENSI
LQTVQHNDYNEDPYAKEFGIKISEKQASLEARVLPAPWLKYHETGKEKDCLPQVGQWNMM
NKKMINGMNVSRWACINFSRSVQESVARGFCNELAQMCQVSGMEFNPEPIIPIYMARPDQ
VEKALKHVYHSCVNKLKGKELELVLVILPDNNGSLYGDVKRICETDLGLITQCCLTKHVF
KISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPS
IAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPARGTVSGGMIRDLLISFRKA
TGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLF
ANNHKDRSSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNF
TADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMTDNGDSPHKGGKA
IREPGVRPLPALKDNVKRVMFYC
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgccattaaggcagatgaaggaaggttcagaacagcacattgttatcaaaccccaagtg
caaaacaccatgaaccaagttcagaaaaaccccaaaacctctcaaaatggcaaagggcca
ccaactcaagaatcccaaaacaacaaaatccataaccaaacatcaccaccttcaagaaac
agaggtagaagaaggggaagaggtggcagaaaatcagatcaaagtgagacatttatgagg
ccaagttcaagaccttgcacagcagcaagcaagccagttatagcagaagtagcaccttct
gttgaagcaacaaatgtgtcaattattgagaataatggaagcagctcagggtttccttct
tcaagcaagtctttgtgttttgcaccaagaccaggttatggccaactagggacaaaatgc
attgttaaagcaaaccatttcttggctgaattaccaaacaaggacttaaaccagtatgat
gttactgtaacccctgaagtgtcatcaagaaatgtgaacagagctatcatggcagaactg
gtgaaactgtacaaagaatctgatctagggatgagattaccagcttatgatggcaggaag
agtctttacactgctggtgaacttccatttaagtggaaggagttcaccattaagcttatt
gatgaagatgatgtgatcaatggtccaaagaggcaaagagagtataaagtcgtgattaag
tttgttgcaagagcaaatttacatcatttgagccaatttcttgctggtaagcgcgctgat
ggtccacaagaagctcttcaaattctggacattgttttgagagagctttcgatcaagagg
tattgtcctgttggaaggtctttcttttcgcctgatatccggaaacctcagcctcttggt
gacggtttagaagcatggtgtggattctaccagagcattagacctactcaaatgggcttg
tcgcttaatattgatatggcttcagctgcatttattgaagctttaccagtgatagagttt
gtagcccagcttcttggaaaagatgtgtcgtcaagacccttatctgactccgatcgtgta
aagattaagaaggctcttagaggagtgaaagtagaagtgacgcacaggggcaatgtccgg
agaaagtatcgagtttcaggactaactgctcagccaacaagagaactagtttttcctgtt
gatgacaatttaaccatgaagtcagtagttgaatactttcaagaaatgtatggctttact
ataaagtatacacatcttccatgccttcaagtagggaaccaaaagaaagccaactattta
cctatggaggcgtgtaaaattgttgagggacaacgatacactaaaagattgagtgagaag
caaattactgctcttttgaaggtcacatgccaaagaccaagagatcgtgagaactcaatt
ttgcagactgttcaacacaatgattataatgaagacccatatgcaaaggagtttggaatc
aaaatcagtgaaaagcaagcatcgttggaagctcgcgtgctgcctgctccttggctaaaa
tatcatgagactgggaaggagaaggattgtctgcctcaagttgggcagtggaatatgatg
aataagaaaatgatcaatgggatgaatgttagccgttgggcatgcataaacttctcacga
agtgtccaagagagtgttgctcgtggcttttgtaacgaactggctcagatgtgtcaagta
tctggaatggagttcaatccggaaccaataattccaatatacatggccaggccagatcaa
gtagagaaagccttgaaacatgtttaccattcatgtgtaaacaagctaaaagggaaagaa
cttgagcttgtattagtcattttaccagataacaacggatccctctatggtgacgtaaag
cggatatgtgagactgatcttggtttaataacccaatgctgtctgacaaagcatgtattc
aaaatcagcaaacaatatttggcaaatgtctccttaaagatcaacgtcaagatgggtggt
cgaaatactgtcctgttggatgctattagctgtagaataccgttagtaagcgatatacct
accatcatatttggagcagatgtgacccacccagaaaacggagaagactccagcccttca
attgctgctgttgtagcatcacaagattggcctgaagtgacaaaatatgctggacttgtt
tgcgctcaagctcatagacaggaacttatacaagatttgtacaagacatggcatgatccg
gcacgtggaacagttagtggtggcatgataagggatcttctaatttccttcagaaaggcc
acaggacaaaagccacaaaggataatcttttatagggatggtgtgagtgaagggcaattt
tatcaagtactgcttttcgagttagatgcaattaggaaggcttgtgcatctttagagcca
aattaccaaccaccagtaacttttattgtggttcagaaacggcatcacacccgactattt
gctaacaatcacaaggacaggagtagcactgataggagtggaaacatattgcctggtact
gtggttgatacaaaaatctgtcatccaacggaatttgacttttatctttgtagccacgct
ggcattcagggtacaagccggccggctcactaccatgttctgtgggatgagaacaatttc
acagcagacggaatccagtccttgactaacaatctctgctatacatatgcaagatgcacg
cgttctgtctccgtggttcctccagcttattatgcacatttagctgcatttcgagctaga
ttctacatggaacccgacatgacggacaatggtgacagtcctcataaaggtggcaaggct
atacgagagccaggtgtccggccattgcctgcgctgaaagataacgtgaagagagtaatg
ttttattgttag
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