KEGG   Lycium barbarum (goji berry): 132610504
Entry
132610504         CDS       T09483                                 
Name
(RefSeq) DNA polymerase epsilon subunit B-like
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03030  DNA replication
lbb03410  Base excision repair
lbb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    132610504
   03410 Base excision repair
    132610504
   03420 Nucleotide excision repair
    132610504
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbb03032]
    132610504
   03400 DNA repair and recombination proteins [BR:lbb03400]
    132610504
Enzymes [BR:lbb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     132610504
DNA replication proteins [BR:lbb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    132610504
DNA repair and recombination proteins [BR:lbb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      132610504
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT CcmE
Other DBs
NCBI-GeneID: 132610504
NCBI-ProteinID: XP_060180801
LinkDB
Position
9:4644766..4646451
AA seq 529 aa
MSGVIRNKSQRKFKMRGYSLKVEALPEVLSFLNHFPSDALDDALELLLDELHHLSLKSSI
LDKESVHKVVSILLEADAAVEENPSSSGSPASALRVIDAFLVPKFRYDPVKKYFHEHTGR
LPIHGDASAKATLYKDRFLLLFQRLSRDPRFSTLAFDATTSEHGSCEISPIQSLVGRVGR
RWIMAVISQLEDGHFYLEDLTAAVEVNLSSAKITTGFFVENTIVLAEGEMQLDGVFQVRT
CGFPPLEDREKFMAFFSGLDFFGGGILTKEETLRLAELEKKAVNDMFVILSDIWLDSEET
LENLETILNGYESVEVVPSLFVFMGNFCSQPFNLSFKSISSLRVQFGKLGQMIASHQRLK
DHSRFLFIPGPDDVGPSTALPRCPLPKYLTEELQKYVPNAIFSSNPCRIRFYTQDIVLFR
QDMLYRMRRSCLIPPSTEETSDPFEHLVATIIHQSHLCPLPLTVQPIIWNYDHGLHLYPT
PHTIVLGDKSEQKAFRYTGVTCFNPGSFSNDGTFVAYRPCNHEVELSAL
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgagtggagttataagaaacaaatcacagagaaaattcaagatgagaggttactctctc
aaagttgaagcactccctgaagtcctctctttccttaaccattttccttccgatgcctta
gacgacgctcttgaactccttctcgatgagctccaccatctttcattgaaatcttcgatt
ttggataaggagtcagtgcataaagtggtgagcattttattggaggcagatgctgctgtt
gaggagaaccctagttctagtggttcacctgcttctgcacttcgtgttattgatgctttt
cttgtacctaaattccgatatgatcctgttaagaagtactttcacgagcatacagggagg
cttcccattcacggcgatgcctctgcaaaagccaccttatacaaggatagattcctctta
ttgttccagagattatctcgtgatccacggttttcaacccttgcttttgatgccactact
tctgagcatggcagctgtgagatatctcccattcaatctcttgttggacgggtaggcaga
agatggataatggcagtaatatctcagttggaggatggtcatttctacttggaagacctt
actgcagctgttgaagtaaatttatcgagtgcaaagataactacaggtttctttgtggaa
aatacaattgtcctggcagagggtgaaatgcagttggatggtgtttttcaggtcagaaca
tgtggatttcctccattagaggacagagaaaagttcatggcattcttttcaggattagac
ttctttggtggtggtattcttaccaaagaggaaactttgagacttgcagagctggagaaa
aaagctgtgaatgatatgtttgttatactatctgatatatggctggacagtgaggagact
ttggaaaatctggagactatcctcaatggttatgaaagtgtagaggtggttccttcttta
tttgtcttcatgggaaatttctgctctcagccattcaatctttcattcaagtcgatctca
agtctcagagttcagtttggaaagcttggacaaatgattgcatcacaccaacgactaaaa
gatcatagtcggtttctttttatccctggtcctgatgatgtaggtccttcaacagcctta
cccagatgtcctttgcctaaatacctaactgaagaacttcagaagtatgttccgaatgca
atattctccagtaacccatgcagaatcaggttttacacccaagacattgtgctattccgc
caagatatgctttatagaatgcgaaggtcatgtctaatacctccctcaacggaagaaacc
agtgatccatttgagcatcttgttgcaactataatacatcaaagccatctctgccccctc
cccttgacggttcaacccattatctggaattatgatcacggtctacacctttatccaacc
ccgcatacgatagttttaggggacaaaagtgagcagaaagctttcaggtacacaggagtt
acatgttttaatcctggctccttctcaaatgatggcacatttgtggcataccggccgtgc
aatcacgaagtagaattatcagcattgtaa

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