KEGG   Lycium barbarum (goji berry): 132610572
Entry
132610572         CDS       T09483                                 
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP
  KO
K09561  STIP1 homology and U-box containing protein 1 [EC:2.3.2.27]
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb04120  Ubiquitin mediated proteolysis
lbb04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    132610572
   04120 Ubiquitin mediated proteolysis
    132610572
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:lbb03110]
    132610572
   04131 Membrane trafficking [BR:lbb04131]
    132610572
   04121 Ubiquitin system [BR:lbb04121]
    132610572
Enzymes [BR:lbb01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132610572
Chaperones and folding catalysts [BR:lbb03110]
 Other chaperones and cochaperones
  Others
   132610572
Membrane trafficking [BR:lbb04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    132610572
Ubiquitin system [BR:lbb04121]
 Ubiquitin ligases (E3)
  U-box type E3
   132610572
  Multi subunit type E3
   STUB1-CHIC2  complex
    132610572
SSDB
Motif
Pfam: U-box TPR_1 TPR_2 TPR_11 TPR_17 TPR_16 ANAPC3 CFAP70_mid_TPR TPR_8 TPR_14 CFAP70_TPR_C TPR_BSK1_C zf-NOSIP TPR_9 zf-Nse BRO1
Other DBs
NCBI-GeneID: 132610572
NCBI-ProteinID: XP_060180875
LinkDB
Position
9:20679399..20687543
AA seq 285 aa
MSPIVGLTGVAKLAEQLKQDGNNYFQKNRFGAAIDAYTEAITLCPNVPIYWTNRALCHRR
RNDWTRVEDDCRKAIQLDHTSVKAHYMLGLALLQKEQYVEGVRALAKALDLGRGANPKSY
MVEEIWQELAKAKYLKWEHESSRRTRELKKLKEACESALKEKHELDSSQMEGFIDDNSTS
LLKQLDALGMVFRKAAEDDTPSEVPDYLCCKITLDIFRDPVITPSGVTYERAVIVDHLQK
VGKFNPVTREPLKESQLVPNFAVKEAVHAFLDKHGWAYRMDSTCY
NT seq 858 nt   +upstreamnt  +downstreamnt
atgtcaccaatagtgggtctcactggggtggccaaactagcagaacaactaaagcaagat
ggaaataattatttccagaaaaatcgatttggggctgccattgatgcatacacagaggct
attacattgtgcccaaacgttcccatatattggacgaatcgcgctttgtgccatcggaga
cgcaatgactggacaagagtagaggatgattgtaggaaggctattcagcttgatcacact
tctgttaaggcgcactatatgcttggtcttgcattgctacagaaagaacaatacgtggaa
ggagtaagagcattagcaaaggcgttggatctcggaagaggtgctaatccaaagagttat
atggttgaagagatctggcaggagcttgcaaaagcaaaatacttgaagtgggagcatgaa
tcttcgagacgcactcgggaactaaagaaattgaaagaagcctgcgagtcagctctcaag
gagaaacatgagcttgatagctctcagatggaagggttcatagacgataattcgacatcc
ctgttgaaacaactggatgccttaggcatggttttcaggaaagctgcggaagatgatact
ccctccgaggtaccagattacttatgctgcaagatcacacttgacatttttcgtgaccct
gtcattacgcccagtggggttacatatgaaagggcagtgatcgttgaccatctgcagaag
gttggaaaatttaacccggttacgcgagaaccccttaaggagtctcagctggttccaaat
tttgccgtaaaagaagctgtacatgcatttttggataagcatggctgggcatacaggatg
gactcaacatgctactaa

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