Lycium barbarum (goji berry): 132610777
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Entry
132610777 CDS
T09483
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbb03000
]
132610777
Transcription factors [BR:
lbb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
132610777
BRITE hierarchy
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
DUF7128
Caskin-Pro-rich
Motif
Other DBs
NCBI-GeneID:
132610777
NCBI-ProteinID:
XP_060181129
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Position
9:complement(27708178..27713557)
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AA seq
494 aa
AA seq
DB search
MNQQESNKQIYHQSNSGCFSLLESSSVLSHQAVMFPEEASVSSMAQNISNQQLQQSQKIK
KKRSLPGNPDPGAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQR
SSKENRKKAYVCPEPTCVHHHPSRALGDLTGIKKHYCRKHGEKKWKCDKCSKIYAVQSDW
KAHSKTCGTREYRCDCGTVFARKDSFVTHRAFCDALAEESARVSANTALMRRATIAPTIS
NSTTTIEPNFHLNQSSLFPFPTNQRHFANPPPPPPTTVVSPVTTHITLNPWDPQPQIPLN
PNPTIHEENHNHNHIVHPVPIKTESIYTPISSSLPFYQDHDRHPVFHKSSFSIPTPPQLS
ATALLQKAASIGTHSTVSHGNSTMAHLNRTTPGHVTPKIMSPEDYLGFGSENMSTHWQKS
ENLTRDFLGLTGDHDHNESSASGSGSLMANGNGRNGVMYGMQDYQETFYERNNSVLKHHP
LGFGFAATGTWGNC
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaacaagagagcaacaaacaaatatatcaccagagcaacagcggttgcttttct
ttattggagtcttcttcagtactctctcatcaagctgttatgttccctgaagaagctagt
gtttcttcaatggctcaaaacatctcaaatcagcaactgcagcagtcacaaaagatcaag
aagaagagaagcctccctggaaatcctgatccaggtgctgaagtgattgctttatcacca
aagacccttttagcaacaaatcgatttgtgtgtgagatctgtaacaagggatttcaaagg
gatcaaaatcttcagcttcataggagaggtcataaccttccatggaaattgaagcaaagg
agcagtaaagagaacagaaaaaaagcatatgtttgccctgagcctacatgtgttcatcac
catccttctagggcacttggtgacctcactggaattaagaaacattattgtagaaaacac
ggtgagaaaaaatggaagtgtgacaagtgttccaagatttatgctgttcagtctgattgg
aaggctcactctaaaacctgtggtacaagagagtatagatgtgactgtggaaccgtcttc
gccaggaaggatagctttgttacacacagagcattctgcgatgctttggctgaagaaagt
gccagggtctcagcaaacacagctctaatgcgtagagccaccattgcccccacaatctca
aactcaaccaccaccattgaacccaatttccatctcaaccaatcatcactcttccctttt
cccaccaaccaacgccatttcgctaaccctccaccaccaccaccaaccaccgttgtctca
ccggtgacaactcatatcaccctcaacccatgggacccacaaccacaaatccccttaaac
cctaaccctactattcatgaagaaaatcataatcataaccacattgtccaccctgttcct
atcaagactgaatccatttacaccccaatttcatcttcgctgccattttaccaagatcat
gatcgtcatccagtgtttcacaagagttctttctccatccctactccccctcaactctct
gctacagcattgctccagaaagcagctagtattggtacacactctactgtgagtcacgga
aattcaaccatggcccaccttaacagaaccactcctggtcacgtgacacccaagattatg
tctccagaggattatctaggttttgggtcggaaaatatgtcgacccattggcagaaaagc
gaaaatctgactagggattttctaggattaacaggagatcatgatcataacgagtcttca
gctagtggtagtggaagcctaatggccaatggaaatggacgaaatggggtgatgtatggg
atgcaggactatcaagaaacattttatgagcgtaacaattcagtgttgaaacatcatcca
ttgggctttggttttgctgcaacaggaacatgggggaattgctga
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