Lycium barbarum (goji berry): 132611233
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Entry
132611233 CDS
T09483
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132611233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lbb02000
]
132611233
04147 Exosome [BR:
lbb04147
]
132611233
04090 CD molecules [BR:
lbb04090
]
132611233
Enzymes [BR:
lbb01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
132611233
Transporters [BR:
lbb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
132611233
Exosome [BR:
lbb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132611233
CD molecules [BR:
lbb04090
]
Proteins
132611233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_29
AAA_30
ABC_ATPase
RsgA_GTPase
AAA_15
AAA_21
AAA_24
Zeta_toxin
AAA_25
Motif
Other DBs
NCBI-GeneID:
132611233
NCBI-ProteinID:
XP_060181634
LinkDB
All DBs
Position
9:complement(31992967..32005655)
Genome browser
AA seq
1235 aa
AA seq
DB search
MSSSSEKALENKNRKSIAIICRYADGKDILLMCLGTIGAIGDGVSTNCLLVYVSHLFNSL
GYGKTQQNNENFMEEIEKCSLYFVLLGLAVMVVAFMEGYCWSKTSERQVLKIRYKYLEAI
LRQEVGFFDSQEATTSEITNSISKDTSLIQEVLSEKVPLFLMHTTVFISGIGFSAYFSWR
LALVALPTIVLLTIPGLIYGKYLLYLSKKSSEEYSKANAIVGQALSSIKTIYSFTAEKSV
IERYSLILDKTIKLGMKQGIAKGLAVGSTGLSFAIWALLAWYGSHLIMHRGETGGRIYAA
GVSFVLGGLSLGMALPEVKYFTEASVAASRIFDRIDRVAEIDSEDTRGVVLENIRGEVEF
RNVKFTYPCRPDSVVLKNFNLKIEAGKTVALVGASGSGKSTAIALIQRFYDTNAGAICID
GVEIKSLQLKWLRGKMGLVSQEHALFGTSIKENIMFGKVDATMDEVVAAAMTANAHNFIT
QLPQGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALD
QAILGRTTLVVAHKLSTVRNADLISVVSNGCISELGAHNELMEKNEQYARLVKLQRQFSS
IDQEQTAEPRISSVARSSAGRQSSVRSSPGVIGSPLLIEESLAQASPHPTPSFSRLLSLN
LPEWKQGIIGILSAIAFGSVQPVYALTIGGMISAFYSQSHEEMQSRIQKYCLIFIILCLV
SVLLNLFQHYNFAYMGEHLTRRIRLRMLEKILTFEAAWFDEEQNSSGALCSRLSNEAAMV
KSLVADRVSLLVQSTSAVTVAMVMGLIVAWKLALVMIVVQPLTILCFYTRKVLLSTITGK
FVKAQYRSTQIAVEAVYNHRIVTSFGSIQKVLDIFDEAQDEPRKEARKKSWLAGIGIGSA
QGLTFICWALDFWVGGKLVNAGEISAADVFKTFFILVSTGKVIAEAGSMTSDLAKGSTVI
ASIFSILDRKSLIQGSYHEAKNNSIGTNLEKMTGRIEMKKVDFAYPSRPNRLVLREFSLE
VKAGTSTGLVGKSGCGKSTVIALIQRFYDVDKGSLKIDGVDIRLLDIEWYRRHMALVSQE
PVIYSGTIRENILFGKLDASEYEVVEAARAANAHEFISSLKNGYDTECGDRGVTISGGQK
QRIAIARAIIRNPTILLLDEATSALDAQSEQLVQEALDQLMVRRTTVVVAHRLNTIRNLD
SIAFVSEGKVLEKGTYSQLKEKRGAFFNLVKLQST
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcatctgaaaaggcgttagaaaataaaaacagaaagtcaatagctattatt
tgcagatatgctgatggaaaagacattttattgatgtgtctgggcacaattggagccatc
ggagatggggtttcaacaaattgtttgttggtatacgttagccatctttttaatagcttg
ggttatggtaagactcaacagaacaatgagaatttcatggaagaaattgaaaagtgcagt
ttatattttgtactattgggattggcagtcatggttgtggcctttatggaaggttactgc
tggagcaaaacgagcgagcggcaagtgctaaaaattcggtacaagtatttggaagccatt
cttaggcaagaagttggtttctttgattcacaagaagctaccacttctgaaatcactaac
agcatttcaaaagatacttctcttatccaagaagttcttagtgaaaaggtacccctattt
ttgatgcatacaacagtcttcatctcaggaattggattttcagcctacttctcatggagg
ttggctttagttgccttaccaacaatagttctcctcacaatccctggtttaatctatgga
aaatatctactttatttgtcgaaaaaatcctcggaggaatacagcaaagcaaatgctatt
gtagggcaggctcttagctccattaaaacaatatattcatttactgctgagaagagtgtg
attgaaaggtattcattgattcttgataaaaccataaagttgggaatgaaacaaggaatt
gcaaaaggacttgctgttggtagcacagggctatcctttgcaatatgggctttacttgct
tggtatggaagccatttgattatgcatagaggtgaaactggtggcagaatttatgctgct
ggagtttcttttgtcttgggtggactatcgcttgggatggctctgcctgaggtgaaatac
ttcacagaagcttctgttgctgcctcaagaatatttgataggattgatcgcgttgcagaa
attgatagtgaagatacaagaggagtcgtgctagaaaatattagaggggaggttgaattc
aggaatgtcaagttcacatatccttgtcgcccagatagcgttgtgctcaagaacttcaat
cttaaaattgaagcaggcaaaacagtggcccttgttggtgcaagtggaagtggaaaatct
actgccattgcgttgatccaaaggttttatgatactaatgcaggagctatatgtattgat
ggtgtagaaataaagtcattgcagttgaaatggttgagaggaaaaatggggttagtaagt
caagaacatgcactatttggaacatctattaaggagaatataatgtttgggaaagttgat
gcaaccatggatgaagttgtcgctgcagcaatgacagcgaatgctcataatttcatcacg
caacttccacaaggatatgagaccaagattggtgaaagaggagcacttctatcaggtggt
caaaagcagagaattgcaattgctcgagccatcataaagaatcctgtaattcttctgctt
gatgaagccacaagtgcacttgattctgaatcagaaacacttgtccaaaatgccttggat
caagccatccttgggagaactacactggttgttgcccacaagctatctacagtcagaaat
gcagaccttatttcagtagtaagtaatggttgcatcagtgaactaggggcacacaatgag
cttatggagaaaaatgagcagtatgcaagactagtaaaacttcaaagacaatttagttct
atcgatcaagaacaaactgctgaacctcgtatttcttcagtagcaaggagcagtgcagga
agacaaagctcagtaagatcaagtccgggtgtaatcggctcacctttgctcattgaggaa
agcctggcccaagcttcacctcatcctaccccttccttctctcgtctcctttcattaaac
ttacccgaatggaagcaaggaattatcggaatcttatctgccattgcttttggttcagtg
caacctgtctatgcactaaccataggtggaatgatttcagctttttactcacaaagtcat
gaggaaatgcaatctagaatccagaaatactgtctgattttcatcatcctttgccttgtc
tcagttcttctcaatctattccaacattacaattttgcttacatgggcgaacacctgacc
agaagaataagactgcgaatgctcgagaaaatcttgacctttgaagcagcctggttcgac
gaggagcagaactcaagtggagctttatgttctcgattgagcaatgaagcagccatggtg
aaatcccttgttgctgatagagtttcactcttggtccaaagcacttcagccgtcactgtt
gctatggtaatggggctaattgtggcttggaaacttgcactagttatgatcgttgtccaa
ccactcacgattctctgcttttacacgagaaaagtcttgctatccactatcacgggtaaa
ttcgttaaggcacaatatcgtagtactcaaattgctgtagaggctgtatataatcatagg
attgtgacgtcgtttgggagcatacaaaaggtccttgacatatttgatgaggcacaagat
gagccaaggaaggaggctaggaagaaatcttggttagctggtattggtataggatcagca
caaggtctaactttcatttgttgggccctagatttttgggttggtggaaagctagttaat
gctggggaaatatcagctgctgatgtcttcaagactttctttatattagtcagcactgga
aaggtaatagctgaagctggaagcatgacttctgatctcgccaagggctcaacagtaatt
gcttctatcttttccattcttgatcgaaaatcacttattcaaggatcctatcatgaggca
aagaataacagcatcgggacgaacttggagaagatgaccggtcgaatagagatgaaaaag
gttgattttgcatatccaagtaggcctaacaggctagtgttgcgcgaattcagcctggag
gtaaaagcaggcactagcactggactggtcgggaaaagtggatgcggaaaatcaacagta
attgccttgattcaaagattttacgatgtagataagggatcactgaaaatcgatggggta
gacattcgattactcgatatagaatggtatagaaggcacatggcgctggtgagccaagaa
ccagtgatatattctggcaccatccgtgaaaacattttgtttggcaaacttgatgcatca
gaatatgaggtggtggaagctgcaagagctgccaatgcacatgaatttatttcgtccctg
aaaaatggatacgacacagaatgtggagatagaggtgtgacaatttcaggagggcaaaag
caaagaatcgccattgctagggcgattatacggaaccccactatactacttctagacgaa
gcaacgagtgctcttgatgctcagtcagagcaacttgtgcaggaagcattggatcaacta
atggttcgaagaacaacagtggttgtggctcaccggcttaataccatcaggaatttagac
tccatcgcttttgtttcagaagggaaggtgttggagaaaggaacttattcacaactaaag
gaaaagaggggggcatttttcaatcttgtcaaacttcaatccacataa
DBGET
integrated database retrieval system
