KEGG   Lycium barbarum (goji berry): 132611364
Entry
132611364         CDS       T09483                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb00040  Pentose and glucuronate interconversions
lbb01100  Metabolic pathways
Module
lbb_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    132611364
Enzymes [BR:lbb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     132611364
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix NosD Tlr3_TMD RabGAP-TBC
Other DBs
NCBI-GeneID: 132611364
NCBI-ProteinID: XP_060181780
LinkDB
Position
9:complement(106588394..106593078)
AA seq 391 aa
MANFKTFFFFSSSILLLLIPSCLAYNVVSFGARGDGKTDSTAPFLRAWMSACSSTSPSNV
YVPRGTYVIRPVTFTGPCRSRIEFRINGTIVAPTDYNVIGGSSFWILFYKVSRLSVYGGT
IDAKGHSFWSCRRSGHSCPPGARSITFLWCNNVLLSGLKSMNSQIMNMAIDYSSHVRVEK
VRIRAPSGSPNTDGIHVENSRDVTITDSIIQTGDDCISLGPGSMNMLIQKIGCGPGHGIS
IGSLANGYNEAGVQNITVANSVFTKTQNGVRIKSWARPSDGYARNLMFRNLVMRNVGYPI
LIDQNYCPDNSCPHESSGVKVSQVTYKSIKGTSSTQQAIKLDCSKTNPCSGITLQDIKLT
FVDYRLKRPALTYCRNAQGTHHGTVMPKSCF
NT seq 1176 nt   +upstreamnt  +downstreamnt
atggccaacttcaaaacatttttctttttctcttcttccattctattattgcttatacct
tcttgtttagcttacaatgtggttagttttggagctagaggagatggaaagacagactca
accgcgccatttcttcgtgcgtggatgtctgcttgcagctcaactagtccttccaacgtg
tacgttcctaggggaacatacgttataaggccagtgacattcactggcccatgccggagc
agaattgagttccggattaatggaactatcgttgctccgacagattataatgtcattgga
ggttctagcttttggattttgttttataaagttagtaggctttctgtctatggtggaaca
attgatgccaaaggacatagtttttggtcttgtagaagatctggtcattcttgccctcct
ggagctaggtcaataacattcttgtggtgtaataatgtactgctaagtggattaaaatca
atgaacagtcagataatgaatatggcaattgattacagcagccatgtgagagtggagaaa
gtgagaataagagcaccaagtggaagtccaaatactgatgggattcatgtagagaattca
agggatgttaccatcacagatagcatcatccaaactggagatgactgcatttctcttggc
cctggatccatgaatatgttgattcaaaagattggttgtggccccggacatggcatcagc
ataggaagtttggcaaatggttataatgaagctggagtccagaatataacagtggcaaat
tcagtattcaccaagacacaaaatggtgtaaggataaagtcatgggcaaggccaagtgat
ggctatgcaagaaatctcatgttcagaaatcttgttatgaggaacgttggctaccccatc
ctcattgatcaaaattattgccccgataacagttgtcctcacgagagttcaggagtaaag
gtgagtcaagtgacatacaagagtataaaggggacatcttcaacacaacaagccataaaa
ttagattgcagcaaaacaaatccatgcagtggtatcacattacaagatataaagctcact
ttcgtggactatcgtttgaaaaggccagccttaacctattgtagaaatgcacaagggaca
catcacggcacagttatgcccaagagttgcttctag

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