KEGG   Lycium barbarum (goji berry): 132612343
Entry
132612343         CDS       T09483                                 
Name
(RefSeq) uncharacterized protein LOC132612343
  KO
K15361  WD repeat-containing protein 48
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    132612343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lbb03400]
    132612343
DNA repair and recombination proteins [BR:lbb03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     132612343
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_SCAP NBCH_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_ACSF4 ANAPC4_WD40 WD40_RFWD3 Beta-prop_DCAF12 RAWUL Beta-prop_Aladin
Other DBs
NCBI-GeneID: 132612343
NCBI-ProteinID: XP_060182610
LinkDB
Position
9:complement(47454692..47478628)
AA seq 758 aa
MHRVASSGNTSNSVRARKEKRFTYVLNDSDDTKHCAGVNCLALLKSSSPDGSEYLFTGSR
DGTLKGWELAEDGATCCATFESHVDWVNDAVLTGNNTLVSCSSDTTVKVWNGLSEGSCIR
TLRQHSDYVTCLASAEKNSNVIASAGLGGEVYIWDLEGALAPTSKSSDATEEDCSNGVSG
SGSSLPMTSIRPNSSSNNISLHTQSQGYIPVSAKGHKESVYALAMNDSGSLLVSGGTEKV
VRVWDPRTGSKTMKLKGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCVHSYAVH
TDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESVLLCTKDHPILQLALHGDSMWVATT
DSSVHKWPAEVHNPQKVFERGGSFLAGNLSFSRARVSLEGSTPVPVYKEPSFSIYGTPGI
VQHEILNDRRHVLTKDTAGTVKLWEITRGAVIQNYGEVSFDKKKEELFEMVSIPAWFTVD
TKLGSLAVHLDTPQCFSAEMYSTDLNIPGKPEDDKVNLARETLKGLLVHWLIKRRRKFGS
QSSINGEVPSGKYVSTRILTASRMELDGNADNDSAVFPPFEFSAAFPPSIMTEGSQSGPW
RKKITDLDGTEDEKDIPWWVIDCVMNNRLPPRENTKCSFYLHPCEGSTAQILTQGKLSAP
RILRIHKVINYVIEKMVLDKPLDSVNSDGTFAPGMHGGTGGDGSFQTGPKPWQKLKPSIE
ILCNNQVLSPDMSLATVRAYIWKKPEDVVLNYRVLPSK
NT seq 2277 nt   +upstreamnt  +downstreamnt
atgcaccgtgtagcaagttctggcaacacatccaattcggtgagggctcggaaggagaag
aggttcacttatgttttaaatgattcagatgacactaagcattgtgcaggtgtaaattgt
ttggctctgttgaagtcatcctcacccgatgggtctgagtacctatttactgggagcaga
gacggcacattaaagggatgggaattggctgaagatggtgccacctgctgtgctacattt
gagtcccatgttgattgggtaaatgatgctgttcttacaggcaataacactttagtttca
tgctcctcagacaccactgtcaaggtatggaatggcttatctgagggatcttgtatcagg
acacttcgtcagcactctgattatgtcacttgccttgcttcagcagaaaaaaatagcaac
gttattgcatctgctggacttggtggtgaggtttacatatgggaccttgaaggtgcactt
gcccctacatctaagtcaagtgatgcaactgaggaagactgttcaaatggtgtcagtggt
tcaggaagttcattgcccatgacaagcatccgccctaatagttcgagcaataacatttcc
ttgcacacccagtctcaaggatatattcctgtgtctgcaaaaggccataaggagtcagta
tatgcattggcaatgaatgacagcggatcccttcttgtttctggtggaactgagaaggtt
gtgcgtgtctgggatccaagaactggttcgaagaccatgaagttaaaaggtcatacagat
aatattagggcgctgcttcttgattctactggcaggttctgcttatccgggtcatctgat
tccatgattagattatgggatctgggtcagcagaggtgtgtgcattcgtatgctgtgcat
accgattccgtatgggcacttgccagcactccaacatttagtcatgtttatagtggtgga
agagatctctctttgtacttaacagatttggcaacaagggaaagtgtcttgctttgtaca
aaggatcacccaattttgcagttagcattacatggtgatagcatgtgggtggccacaact
gattcttctgttcataagtggccagcagaagtgcataatccccagaaagttttcgaaaga
gggggttcgttcttggctggaaacttgtccttttccagggcaagggtttcattagaggga
tctacccctgtacctgtctataaagaaccttcctttagcatttatggaactccaggaata
gtgcagcatgagattttgaacgacagaagacatgtcttgaccaaggatactgctggtaca
gttaagttgtgggagatcacaagaggggctgtaattcaaaactacggagaggtttcattt
gacaagaaaaaggaagaattatttgagatggtaagcatccctgcatggttcactgtggac
acaaagctcggaagcttggctgtacatttggatactccacaatgcttttctgctgagatg
tactccactgacctcaacatccctgggaaacctgaagatgacaaggtcaatttggcacga
gaaacacttaaagggctgttggtgcattggttaatcaaaagaaggcggaaatttggatct
caatcgtcaattaatggagaagttccatctggaaaatatgtatctacaaggattttgact
gcatctagaatggaattagatggtaatgctgataatgattctgcagtgtttccccccttt
gaattttcagcagcatttcctccatccatcatgactgagggctctcaaagtggtccttgg
aggaaaaagatcaccgacttagatggaactgaagacgagaaggacattccatggtgggtt
atagactgcgtgatgaacaatcggctgcctcccagggaaaataccaaatgtagcttttat
ttgcatccatgtgaaggttctactgcccagatccttacccaaggcaaactgagtgcacct
cgcatattaagaattcacaaagttatcaattatgtcatagaaaagatggttctcgacaag
cctttggatagcgtaaactcggatggaacttttgctcctggtatgcatggaggtactgga
ggagatggctcattccagactgggccgaagccttggcaaaagcttaagccatctatagag
atcctgtgcaataaccaggttttatcccctgatatgagcttagcaactgtccgggcctat
atatggaagaaacctgaagatgttgtacttaattaccgtgtgttgccgagcaagtga

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