| Entry |
|
|---|
| Name |
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DEAH11, chloroplastic-like
|
|---|
| KO |
|
|---|
| Organism |
lbb Lycium barbarum (goji berry)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:lbb00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132612644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:lbb03041]
132612644
Enzymes [BR:lbb01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132612644
Spliceosome [BR:lbb03041]
Complex C
Other components
Step II factors
132612644
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
10:complement(5603171..5611821)
|
|---|
| AA seq |
983 aa
MPLEVTVLFGETGSGKSTPLAQFLADSGIAGNGSMICTQPRKLTANSLASRVREESQGCY
DDNSITCQQFDSKISFITGHCLLQHYMDYKTLSKISCIIVDEAHERSLNTDLILALIKKL
LDQRIDLRLIIMSATVDANQLADYFLGCRTFHVAGRTFPVDIKYVPCESDGTSYVYGVIK
MVTDIHRSEGEGAILAFLTSQSEVEFACEKFQASLVVVLPLPLHGKLSYDEQNRVFLHYP
GRRKVIFTTNVAETSLSIPGVKYIVDSGMVKESRFEPGTGMNTLRICSVSQSSANQRAGR
ARRTEPGKCYTLYSQSDFEGMPRHQEPEIRKVHLGLAVMRILALGIKNVQDFDFVDAPSP
KAIEMATRNLVQLGAVTQREDDDTYELTAQGLKLVKLGYEPRLGKMILSCFDQCLSKEGV
VLAAVTANCSSIFCRVGSKGDKLKSDRRKVKFCHPNGDLFTLLSVYREWEMVPGDKKNNW
CWDNSINAKSMKRCEETVLEIVACLKNELNMIVASYWSWHPRVHAEHDEVLKNIIISSLA
ENVAMYSGYDQLGYEVALTGKSVGQFAELPFFWDVECKLERNDNGSYIVKISATATKVVV
ETRRSLEQLMKGKIVDHVDITPTIVQLLFSREGSNIMNMIQKETGTCILFDKHNLLVRIF
GSSDNVVNMAQQRFIDSLLALHESKQLEVHLRGRLLPPDLMKRVVQTFGPDLSALKEKVP
GAEFSLNTKRHCICINGTKNLKQKVEEIICEIAQRSFPTQTTGDEADCPVCLCDLEDPYR
LEACVHAFCRSCLLEQCKSAIKSREGFPLCCMHQGCREPILLADLKSLLSSEKLEELFRA
SLGAFVAANXGSYRFCPSPDCPSVYCVADSNMVGSPPFVCGACYVETCTRCHLEYHPYSC
ETYKEFKGNPDSSLMEWSKGKDNVKKCPVCSFTIEKVDGCNHIECRCGKHVCWACSRFFD
SSDNCYDHLRSVHRSITWENRES |
|---|
| NT seq |
2952 nt +upstreamnt +downstreamnt
atgcccctcgaggtgacggttttgtttggagagactggatcaggaaagagtacaccatta
gcgcaattccttgctgattcaggaatagctggaaatggttctatgatttgcactcagcct
cggaaactcactgccaactctttagcaagtcgagttagagaggaaagccaggggtgctac
gacgataattcgatcacctgtcaacagtttgattcaaagataagttttatcacaggtcac
tgcctattacagcactatatggattacaagactttgtccaagatttcatgcatcatagtc
gacgaggcacatgaaagaagcttaaacaccgatcttattttagcgttgataaagaaacta
cttgatcagaggattgatctgaggcttattattatgtctgccacagtcgatgcaaaccag
ctcgctgattacttccttggttgtcgaactttccatgttgccggtagaacttttcctgtt
gatattaagtatgtgccctgtgaatctgatggaacctcttatgtctatggtgttatcaaa
atggtgactgatatacataggagtgagggagagggagctattttagcctttttgacatct
cagagtgaagttgagtttgcttgtgagaagtttcaagcatctctggttgttgttttacct
ttacctttgcatggcaaattatcatatgatgaacaaaacagagtgtttcttcattatcca
gggaggagaaaggttatattcaccacaaatgttgctgagacatcactctcaattcccggt
gtcaaatatattgttgattctggcatggttaaagaaagcaggtttgaacctggcactggc
atgaatactctcaggatatgcagtgtgagccaaagttctgcgaaccaaagagctggtcgt
gcacggagaactgaacctggaaaatgctatacgctgtactctcaaagtgatttcgagggt
atgccacgtcatcaggaacctgaaattcgcaaagttcatcttggtcttgcagtgatgaga
attcttgctttaggtatcaagaatgtacaggattttgattttgttgatgcacctagcccc
aaagctattgagatggccactcgaaatctggttcagctaggagctgttacacaaagagaa
gatgacgatacatatgaattaactgcacaaggacttaaactggtcaagttgggttatgaa
cctcggttgggaaaaatgatcctcagttgctttgatcaatgtttgagtaaagaaggtgtt
gtgcttgctgccgttacggcgaattgtagtagcattttctgtagggtcggttctaaagga
gacaagctaaagtctgatcgccgtaaggtgaaattctgccatccgaacggtgacctcttt
actttactatctgtttacagggaatgggagatggtgcctggagacaaaaagaacaactgg
tgttgggataatagtatcaatgccaaatccatgaagagatgcgaggagactgtactggaa
atagtagcctgccttaaaaacgagctaaatatgatcgtcgccagttactggagctggcat
cctcgagtgcatgccgagcatgacgaagtactgaaaaacataattatttcttcacttgcg
gaaaatgttgctatgtactcaggttatgatcagcttggttacgaggttgcgctaaccggg
aagtctgtggggcaatttgcagaattgcccttcttttgggatgtggagtgcaagttagag
agaaatgataacggttcctatatagttaagatatctgccactgccaccaaagttgtggta
gagacgagaaggtccttggagcaacttatgaaaggaaagattgtagatcacgtggacatt
actccgactattgttcaacttctgttctctcgagaaggaagtaacattatgaacatgatt
cagaaggaaacaggaacttgtattctctttgacaagcataacttgcttgtaagaatcttt
ggttcttcagacaatgttgtaaatatggctcagcagagatttattgattcccttctggca
ttacatgaaagtaaacaacttgaagtgcatcttcgtggacgacttttgcctcctgacctg
atgaaaagagttgttcagacgtttggaccagatcttagtgcgcttaaagaaaaggtgcct
ggagcagaattctctctgaacacaaagcgtcattgcatctgtatcaatggtactaaaaac
ttgaagcaaaaagttgaggaaataatctgcgaaattgctcaaagaagttttccaactcaa
acgacgggagatgaggcggactgtcctgtttgcttgtgtgatttggaggatccttataga
cttgaagcttgtgtccatgcgttctgtcggtcatgtttgctagagcaatgcaagtccgca
atcaaaagccgggaaggtttccccttgtgttgtatgcatcaaggttgccgggaacccatt
ttgctcgctgacttgaagtctctattgtcgagtgagaagttggaagaacttttcagggct
tctttgggagcttttgtggcagccaacnggggtagttatcgcttttgtccctcaccagac
tgcccttcagtttattgtgttgcagattccaatatggttggttcaccgccatttgtctgt
ggtgcatgctacgtggagacgtgtacgagatgccacctggagtatcatccgtactcatgt
gagacgtacaaggagttcaaaggcaatccggattcctctctaatggaatggtccaagggg
aaagacaatgtaaagaaatgtccggtgtgcagctttacaatcgagaaggtggatggctgc
aatcatatcgagtgtaggtgcgggaaacatgtttgctgggcttgttcgcggttcttcgac
agcagtgataattgctatgaccatttgaggtctgttcaccgctccattacatgggaaaat
agggaatcatag |
|---|
