Lycium barbarum (goji berry): 132612685
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Entry
132612685 CDS
T09483
Name
(RefSeq) LOW QUALITY PROTEIN: threonine--tRNA ligase, mitochondrial 1-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132612685
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lbb01007
]
132612685
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132612685
Enzymes [BR:
lbb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
132612685
Amino acid related enzymes [BR:
lbb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
132612685
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132612685
Prokaryotic type
132612685
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
TGS
tRNA_SAD
HGTP_anticodon
tRNA-synt_His
Motif
Other DBs
NCBI-GeneID:
132612685
NCBI-ProteinID:
XP_060182779
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Position
10:8395692..8410681
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AA seq
610 aa
AA seq
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RIELPSGTVKEGKKWNTTPLDIAKEISKSLASNALIAKVNGVLWDLLRPLEGDCKLELFT
FNSDEGRDTFWHSSAHILGESLERKYGCKLCIGPCTTRGEGFYYDAFYGDLGLNEDHFKG
IEAEAAQAVSEKQPFECIEVSRQQALDMFSDNRFKVEIIKDLPEDKTITVYRCGPLVDLC
RGPHIPNTSFVKALACTKASSAYWRGDKDRESLQRVYGISYPDKKQLKEYLAFLEEAKKF
DHRELTKKQELFFFHPLSPGSCFFLPHGARVCNKLLEFMRSQYWKRGYEEVWSPNMYNMQ
LWETSGHAANYKENMFVFEIEKQEFGLKPMNCPGHCLIFDHRVRSYRELPLRLADFGVLH
RNEASGALTGLTRVRRFQQDDAHIFCRESQIKVEVKGGLEFISYVYKIFGFTFDLKLSTR
PEKYLGDIETWVKAEAALSEALNEHGKPWEINEGDGAFYGPKIDISVSDAMNRKFQCATL
QLDFQLPQRFNLSYSAEDESKRERPVMIHRAILGSVERMFAILLEHFKGKWPFWLSPRQA
MVCPVSDKSQSYALEVREAQVAQYNYILVVGETEASSGQVSVRVRDKPDHQVMTVDGLLG
HFKDMVASFQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
aggattgagttaccgagtgggactgtgaaggaggggaagaaatggaatacaacacctttg
gatatagcaaaggaaatttcgaagagcttggcttccaatgctttgatagcaaaggtgaat
ggggtgctttgggatttgttgaggccattggagggtgactgtaagctcgagctcttcact
tttaacagcgatgagggccgcgatacgttttggcactcgagtgctcacattcttggcgag
tcattggagaggaagtatggttgcaaattgtgtattggaccgtgtacaacaagaggagag
ggtttctattatgatgccttttatggtgatctagggttaaatgaggatcactttaaaggg
attgaggcggaggcagcacaagctgtttcggagaaacagccttttgaatgcattgaagtt
tcacggcagcaagctcttgatatgttctctgataataggtttaaggttgaaatcataaaa
gatttacctgaagataaaacaatcacagtatatagatgtggtcccttggttgatctatgc
cgtggtccgcatattccaaatacatcttttgttaaagcactagcttgtacaaaggcttca
tcagcatattggaggggagacaaggaccgtgaaagcttacaaagagtttatggaatatct
tatcccgataagaaacagttgaaggaatacctagcttttctggaggaagcaaagaaattc
gatcacagagagctgactaagaagcaggagcttttcttctttcatccactaagccctgga
agttgtttctttcttccacatggtgctcgagtttgcaacaaattgctggagttcatgcgg
agtcagtattggaagagaggctacgaggaggtttggagtccaaatatgtacaatatgcag
ttgtgggaaacttcaggtcatgctgcaaattacaaggagaacatgtttgtgtttgagatt
gaaaagcaagaatttgggctgaagccaatgaactgccccggtcattgtttaatatttgat
cacagggttcgttcctacagggagctaccacttcgtctggctgactttggggttctgcac
aggaatgaggccagtggtgcacttactggcttgacgcgtgtcaggagatttcagcaggat
gatgctcacatcttttgcagagagtcgcagattaaggttgaagtcaagggtggcttagag
ttcatcagctatgtgtataagatatttggtttcacttttgacctgaagttatctacgagg
cctgaaaaatatctcggagacatcgaaacttgggtgaaggctgaagctgctctttctgaa
gcattgaacgagcatgggaagccctgggagatcaatgaaggagatggagcattttacggc
ccaaaaattgatataagtgtttctgatgcaatgaataggaaattccagtgtgcaacattg
cagcttgatttccaactccctcaacgtttcaacctatcatactcagcagaagatgaaagt
aagagagagagaccagttatgatacacagagcgatccttgggtcagttgagcgtatgttc
gctattcttttggagcatttcaaggggaaatggcctttctggcttagtccacgtcaagca
atggtctgccctgtttccgacaaatctcaatcatatgcacttgaggtacgagaggctcaa
gtggcacaatataactatattctggttgttggagagactgaagccagtagtggccaggtg
agtgttcgagtgagagacaaacctgatcatcaagtcatgacagttgacggcctccttggt
cacttcaaagatatggttgcatcatttcagtag
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