Lycium barbarum (goji berry): 132613660
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Entry
132613660 CDS
T09483
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03015
mRNA surveillance pathway
lbb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132613660
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
132613660
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lbb01009
]
132613660
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132613660
03036 Chromosome and associated proteins [BR:
lbb03036
]
132613660
Protein phosphatases and associated proteins [BR:
lbb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
132613660
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
132613660
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
132613660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
PDS5
Htt_N-HEAT_1
HEAT_EZ
Adaptin_N
Cnd1
SCD
CLASP_N
INTS7_N
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
132613660
NCBI-ProteinID:
XP_060183767
LinkDB
All DBs
Position
10:complement(103898452..103909908)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAVLIDELKNDDIQLRLNSFRRLSTIARALGEERTRRELIPFLSENNDDD
DEVLLTMAEELGVFIPDVGGVEHAHVLIPPLETLCTVEETSVRDKAVESLCRIGSQMRES
DLLDWFVPLVKRLARGEWFTARVSACGLFHIAYPSAPEMLKTELLSIYSQLCQDDMPMVR
RSAATNLGKFAATIEPAYLKTDIMTIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYVVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFSRILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGTLCMHWLQDKVCSIRDAAANNLKRLAEEFGPEWAMQHIVPQV
LDVINSSHYLYRMTILRAISLLAPVMGSEITCSKLLPVVITASKDRVPNIKFNVAKVLQS
LIPIVDQSVGEKTIRPSLVELAEDPDVDVRFYANQALHSIDNVMVSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgattgatgagccattgtacccaatagctgtgctaatagatgagctgaagaat
gacgacattcaattgcggttgaattcttttaggaggttatctactattgcacgagcactc
ggtgaggaaagaaccaggagggagttgatcccatttttgagcgaaaacaatgacgacgac
gatgaggtgctacttaccatggcagaagagttgggtgtttttattcctgatgttggagga
gtggagcacgctcatgtgttaatcccacctctggaaaccctttgcactgtagaggagacc
tctgtgagggacaaagctgtggagtcattgtgtagaattggatcccagatgagggagagt
gatttgcttgattggtttgtccctcttgtgaagaggctggcccgtggtgagtggttcacg
gctagagtttctgcttgtggactgtttcacattgcttacccaagtgcccctgagatgtta
aagacagagctcctgtccatatatagccagttgtgtcaagatgacatgcctatggtgaga
aggtcagctgcgaccaacttggggaagtttgctgctactatcgaaccagcttacctcaag
actgacatcatgacaatatttgaggatcttacacaggatgatcaagattctgtacgctta
ctagcagttgagggctgtgctgcactaggcaagttgctggagccccaggattgtgttgca
catattcttcctgtcattgtcaacttctctcaggataagtcttggcgtgtacgatatgtg
gtcgcaaaccagttgtatgagctctgtgaagctgtaggacctgagcccaccaggacggac
ttggttcctgcttatgtgcgtttgctgcgggataatgaagctgaggtgcgtatagcagct
gcagggaaagtcaccaaattcagtcggattcttaatcctgagcttgctatacagcacatt
cttccctgtgtgaaggaattgtcatcagactcttcgcagcatgttagatctgctttggct
tcggttataatggggatggctcctgtcttgggaaaggaagcaaccattgaacatcttctt
ccaatttttctttcccttctaaaggatgaatttcccgatgtgcgcctcaacatcattagc
aaacttgatcaagtcaatcaggtgattggaattgatttattatcccaatctctgttgcca
gctattgttgagctggcagaggataggcattggcgagttcgtctggctataatagaatac
atacctctgttggccagtcagttgggtgtaggattttttgatgataagcttggcaccctt
tgcatgcattggttacaggacaaggtttgttcaatcagagacgctgcagctaataactta
aagcgccttgcagaagaatttggtccagagtgggcaatgcagcatatagttcctcaggtc
ttggatgtgattaatagttcacattatttgtaccggatgacaatacttagagcaatttct
ttacttgcacctgtgatgggttctgagataacatgttctaagttgctgccagtggttatt
acggcctcaaaggacagagtgcccaacatcaaatttaatgttgcaaaggtgttgcagtcc
cttatccccatcgttgaccaatcagtaggggagaaaacgattcgccctagtttagtggag
ctagctgaggaccctgacgtcgatgttcgtttttatgcgaatcaagcacttcattcgatt
gataatgtcatggtgtcaagttag
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