Lycium barbarum (goji berry): 132613971
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Entry
132613971 CDS
T09483
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132613971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132613971
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
132613971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
DZR
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
132613971
NCBI-ProteinID:
XP_060184276
LinkDB
All DBs
Position
10:1328804..1335358
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AA seq
537 aa
AA seq
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MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPITRLIREYN
VRACSSNDKNYFIARFASGLPKFSKKKNDSKWTLQKEGLQGRQVTDTLREKYKNKPWLLE
DETGQFQFHGQLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKMK
NRRKTADGYQRWMMKAANNGPAAFGEVERFDDKESGSGGTRGRKKASGDEDEGNASDHGD
EDEEEEAARKNRLGLNKRGDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGID
REEDLVPEIPAPPEIKQDDDDEDEGEEEGGGGLSKSGKELKKLLGKADGLNESDAEDDDD
DDDDAEEDISPVLAPKPKEAPKEEPIETSSPSKPAAAGSNRGTPASKSAKTKRKANGDES
KPTNGAPLKKVKTETDAKPGKDETPSTAKNSALPKGASTSSKTAPSTATGPVTEDEIRAV
LLQRKPVTTQDLVSQFKSRLKCKEDKSAFADVLRKISKIQKTASGSSYVVLRERTNQ
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattgatttgatactgaaaccttcatgtagcaggtgcggttcgtcatcagatttg
tatggaagttcatgcaagcatttgactctttgtttgtcttgtggtaaaaacatggctgaa
acacgcgataaatgctacgaatgtggcactcctattacgcgattgattcgagagtataac
gttcgggcttgctccagcaatgacaagaattatttcattgctagatttgcttcaggctta
cctaaattttcaaaaaagaagaatgacagtaaatggactttacaaaaagaaggtctgcaa
gggcgtcaagttacggacactttgcgggaaaagtacaagaataaaccatggctattagag
gatgaaactggccaatttcagttccatggtcagcttgagggagcacagtcagcacaatat
tatctactgatgatgcagggtgaagagttatttgctattcccgctggttcttggtataac
ttcaacaaagttgcccaatataagcaacttactctggaggaagcagaagagaaaatgaaa
aatagaagaaaaactgcagatgggtaccagagatggatgatgaaagcagcaaataatgga
cctgctgcttttggtgaagtagaaagatttgatgacaaagaaagtggatctggtgggaca
agggggcgtaagaaagcttctggtgatgaggacgaaggcaacgcgtcagaccatggggat
gaagatgaggaagaggaggctgctaggaaaaacaggttgggactcaacaaaagaggcgat
gatgatgaagagggtcctagagggggcgatcttgacctggatgatgatgatattgaaaaa
ggggatgactgggagcatgaggagatttttacggatgatgatgaagctgttgggattgat
cgtgaggaggatttggtgcctgaaattcctgctcctcctgagattaagcaggacgatgat
gacgaggatgaaggtgaagaagagggaggagggggtttgagcaaatctggaaaagagttg
aaaaagttgcttggaaaagccgatggattgaatgaatcagatgctgaagatgacgatgat
gatgatgatgatgcagaagaggatatttcacccgtattagcccctaagccgaaggaagct
cctaaagaagaaccgattgagaccagcagtccttcgaaaccagctgctgctggatccaac
cgtggaactccagcttcaaagtcggctaagactaaaagaaaagctaatggagatgagtca
aaaccaactaatggtgctcccctgaaaaaagtgaaaacagagacggatgcgaaacctggg
aaagatgaaactccatctactgcaaagaacagtgctctcccaaagggtgcatcgacctct
tccaaaactgctccaagtactgccacaggtcctgttactgaagatgagattagagctgtt
ctattgcagagaaaaccagtgaccacacaggatcttgtcagccaatttaaatctcgtttg
aaatgtaaagaggataagtctgcttttgccgacgtattgaggaagatctccaagatacag
aagactgcttcaggaagtagctatgtcgtgttacgagagaggacaaatcaatag
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