Lycium barbarum (goji berry): 132613998
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Entry
132613998 CDS
T09483
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 7, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00900
Terpenoid backbone biosynthesis
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
Module
lbb_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
132613998
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lbb01006
]
132613998
Enzymes [BR:
lbb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
132613998
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
132613998
2.5.1.29 geranylgeranyl diphosphate synthase
132613998
Prenyltransferases [BR:
lbb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
132613998
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
EcsC
UbiA
Motif
Other DBs
NCBI-GeneID:
132613998
NCBI-ProteinID:
XP_060184313
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All DBs
Position
10:3919190..3921776
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AA seq
365 aa
AA seq
DB search
MAFLATISGHENLLLSNTLNNNLTFSRKPLPSHSYSFLRKKNQASNVANSFQTFQVKEQE
ISSKTEKFILPKFDFQEYMEMKAIKVNKALNDAIPMQEPIKVHEAMRYSLLAGGKRVRPI
LCMASCEVVGGDESLAIPAALAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGENTA
VLAGDALLSLAFEHVATKTRNVTPQRVVQAIGELGSAVGSVGLVAGQIVDLASEGKQVSL
SELEYIHHHKTGKLLEAAVVCGAIMGGGKEVDVERMRNYARCIGLLFQVVDDILDVTKSS
DDLGKTAGKDLMTDKATYPKLMGLEKARQLAGELVAKAMDELSYFDTAKAAPLYHFADYI
AHRQN
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcatttttagctaccatttctggccatgaaaatctgctcctttctaataccctaaac
aataacttgactttcagtagaaagcccctacctagccattcttacagtttccttcgcaag
aaaaaccaggctagcaatgtcgcgaactcgttccaaactttccaagtcaaagaacaagaa
atttcatccaagacagagaaattcatcttgcctaagtttgactttcaagaatacatggaa
atgaaggcaatcaaggtaaacaaagcactaaatgatgcaataccaatgcaagagcctata
aaagttcatgaagccatgaggtactcacttctagctggtggaaagcgcgtccggccgatc
ctctgcatggcttcttgtgaagttgtaggaggagatgaatccttagctattcctgcagct
cttgcagttgagatgattcataccatgtcactgatccacgacgatcttccctgcatggac
aatgatgatctacgtcgtggcaagcccacgaaccacaaggttttcggggaaaacacagca
gttcttgcaggggatgcacttttgtctttggccttcgaacatgtagctaccaagactcga
aacgtaacaccccaaagagtggttcaagccattggggaactgggttcagctgttggctcg
gtagggctcgtggcagggcagattgtggacttagctagtgagggaaaacaagtgagccta
agtgaattggagtatattcatcatcataaaacagggaagcttttggaggctgctgtggtt
tgtggggcaataatggggggcggaaaagaagttgatgtggagaggatgaggaactatgct
aggtgcattgggttgttgtttcaagtggtagatgatattcttgatgttactaagtcatca
gatgacttgggaaagacagctggtaaggacttaatgactgataaggctacatatcctaag
ttgatggggctagaaaaggctcggcaacttgccggtgagctggtggctaaggccatggat
gagctgagctactttgataccgccaaggcggcacctctttatcattttgctgactatatt
gcacatcgccagaattga
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