Lycium barbarum (goji berry): 132614035
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Entry
132614035 CDS
T09483
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132614035
04121 Ubiquitin system [BR:
lbb04121
]
132614035
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132614035
Membrane trafficking [BR:
lbb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
132614035
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132614035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3H2C3
Rad50_zn_hook
zf-ANAPC11
DUF7385
FYVE_2
Motif
Other DBs
NCBI-GeneID:
132614035
NCBI-ProteinID:
XP_060184363
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All DBs
Position
10:114357090..114358874
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AA seq
376 aa
AA seq
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MSSTYWCYRCNRSYRFVNQDSITCPDCNSGFIEEIGSGRVSGSSPGQPRTRRTTNGNNGG
GGDRSTPFNPVIVLRGGGVGGTGSEAGSGSGFELYYDDGAGSGLRPLPSSMSDFLLGSGF
DRLLEQLSQIEANGMMIGSRLENNNNNVNPPASKSAIENLPTIEIVNSHIVSDTCCAVCR
EEFCLGNEAREMPCKHIYHSDCITPWLALRNSCPVCRHELPSESPNVDSANNDEEEEAVG
LTIWRLPGGGFAVGRLGRRGSGERALPVVFTEMDGGFGNGNGNGVNGVQRRILWGSRGDV
TRQNGAIRRFFGNLFSCFGGGVVGGGSSGSSTTSSDSRIINNGSRSSSNSMSSVFLATAR
RRRGWGFEGNNGVRRW
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacatactggtgttatagatgcaatagatcttacagatttgtaaaccaagat
tcaatcacctgccccgattgcaattccggcttcatcgaagaaatcgggtcgggtcgtgtt
tccgggtcaagtccgggtcaacccagaacccgcagaaccactaacggtaataatggtggc
ggtggtgacaggtcaacaccgtttaatccagtcatcgtcctacgtggcggcggcgtcgga
ggaaccgggtcagaagccggatccgggtcgggcttcgagctgtattatgatgatggagcc
gggtcgggtttgaggcctttaccgagtagtatgtcggattttctactcgggtcgggtttt
gataggttgttggaacagttatcacaaattgaagctaatggtatgatgattggttcaaga
ttggaaaataataataataatgttaatccaccagcttcgaaaagtgctattgagaattta
cctacaattgagattgttaattcacatattgtaagtgatacttgttgtgcagtttgtaga
gaagagttttgtttaggtaatgaagcacgcgaaatgccttgtaagcatatttatcattcg
gattgtataaccccgtggcttgcgttgcgtaattcgtgtcctgtttgtaggcacgaattg
cccagtgaaagcccgaatgtagatagcgcgaataatgatgaggaagaagaagcggttgga
ttaacgatatggagattaccgggtggtggatttgctgtgggtaggttaggtagaagaggt
agtggcgaaagagcgttacccgttgtgtttactgaaatggatggtggttttggtaatggt
aatggtaatggggttaatggggttcaaaggaggattttatggggttctagaggtgatgta
acgcgacaaaatggtgcgattaggaggttttttgggaacttgttttcttgttttgggggt
ggtgttgttggtggtggttcgtcagggtcgagtactactagttcggattcaaggataata
aataatgggagtagaagtagtagtaattcgatgtcgtctgtgtttcttgcgacagcaaga
aggcgtagaggatggggatttgaaggtaataatggagttagaagatggtaa
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