KEGG   Lycium barbarum (goji berry): 132614304
Entry
132614304         CDS       T09483                                 
Name
(RefSeq) SART-1 family protein DOT2
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132614304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lbb03041]
    132614304
   04121 Ubiquitin system [BR:lbb04121]
    132614304
Spliceosome [BR:lbb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    132614304
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    132614304
Ubiquitin system [BR:lbb04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132614304
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 132614304
NCBI-ProteinID: XP_060184696
LinkDB
Position
10:complement(7843589..7854929)
AA seq 919 aa
MGMMEIDGRERSAERRDHDDSPVKERWEDGHYDLEESGYDKSKDSSKHRSKDRKSSGRRE
EKEYKRDRESKELEKDRSSARDRRKEDRDERERDKTREKIREKDSDRDKYKDKERERDKD
RRDRGKEKERDRDRERDTERVREKERGKDKGRDKEKDKEKEKERSKDKEREKHRDKEKEK
EREYDRERGRDAVEKEKGRERTKEKGKEVDEDKERSRDKDRGSRRQRDEGHDRSKDRRKD
DVQRVEDSDSDYQDAAKQETVSHEDEDRAQNNAVETAGSRSELEERILKMKEERLKKKSE
GASEVLSWVNKSRKIEEKRNAEKERALQLSKIFEEQDKMNGEESDEEENARLAAKELGGM
KVLHGLDKVVEGGAVVLTLKDQSILAGDDINQEVDMLENVEIGEQKRRNDAYKAAKKKTG
IYDDKFNDEPGSERKILPKYDDPAEEEGVTLDATGAFSVDAEKKLEELRKRLQGPSSKNL
AEDLNSSGKLLSDYYTQEEMVQFKKPKKKKSLRKKEKMDLDALEAEAKSAGLGVGDLGSR
NDKTRQVLKEEKERAEAETRSNAYQAAYAKAEEASKALRPEKSTKNQREEDDAVFDDDDE
ELRKSLERARKLALRKQEGLAKTFPESIASLAASRSNDSTMDNPSSVSGESHENKVVFTE
MEEFVWGLQLDEEEQKPGSDDVFMEEDVLPKPSDEEMKNEDGGWTEVKETKEEEPSVKEE
EMEVAPDETIREVPVGKGLSGVLKLLQDRGTLKEDIDWGGRNMDKKKSKLVGIRSEDGKK
EIHIERTDEYGRILTPKEAFRLLSHKFHGKGPGKMKQEKRMRQYQEELKIKQMNNSDTPS
QSVERMKEAQVQFKTPYLVLSGNVKPGQTSDPRSGFATVEKDLPGGLTPMLGDKKVEHFL
GIKRKHEPGEGSSQKKPKT
NT seq 2760 nt   +upstreamnt  +downstreamnt
atgggaatgatggagatagatggacgtgaaagaagtgctgaaaggagggatcatgatgac
tcccctgttaaggagaggtgggaagatgggcactatgatttggaagaaagcgggtatgat
aaatctaaagattcaagtaagcatcgaagcaaggataggaaaagtagtggccgaagagaa
gagaaagagtataaaagagatcgggagagtaaagagttggagaaagataggtcatcagct
cgagataggaggaaggaggatagagatgagcgtgaaagggataagacaagggagaagatt
agggagaaagatagtgatagggacaagtacaaagataaagaacgggaaagagataaagat
cgtagagatcgtggaaaagaaaaggagcgagaccgcgatagagagagggatactgagcgg
gtgcgagagaaggaaagagggaaggacaaaggcagggacaaggagaaggataaagaaaaa
gaaaaggagaggagcaaggacaaggaaagggagaagcatagagataaggaaaaggaaaaa
gaaagggagtatgacagggaaagaggtagagatgcagttgagaaggaaaaggggagagag
agaactaaagagaaagggaaggaagtggacgaggataaggagaggtcaagagacaaagat
aggggcagccgtaggcagcgagacgagggtcatgataggagtaaggacaggcggaaggat
gatgtgcaaagagtagaagattctgattctgattatcaggatgctgccaagcaagaaaca
gtttctcatgaggatgaggatagggcacaaaacaatgcagttgaaacagctggatcacgt
tcagagctggaggaacgcattcttaagatgaaggaagaaaggttgaagaaaaaatcagaa
ggtgcttctgaggtgttgtcgtgggttaacaagagccgtaagattgaggagaaaaggaac
gctgagaaggagagagccttgcagctttcaaagatttttgaagagcaggacaaaatgaat
ggagaagaaagcgatgaggaggagaatgcccggctagctgcaaaagagctaggtgggatg
aaagtactccatgggcttgacaaagtagttgaaggtggggcagttgtcttgacactcaaa
gatcagagcatacttgctggtgatgatattaatcaagaggttgatatgcttgaaaatgtg
gaaattggagagcagaagcggaggaatgacgcttacaaggctgcaaaaaagaaaacaggg
atctacgatgacaagttcaatgatgagcctggttctgaaaggaaaatattaccaaaatat
gatgacccggctgaagaggagggcgttactcttgatgcaactggagctttcagtgttgat
gcagagaagaaactggaggagctccggaaaaggcttcaggggccttcctcaaaaaatctg
gcggaagatctcaattcttctgggaaattattgtccgactactatactcaagaggaaatg
gttcaatttaagaagcccaagaagaagaaatcactgaggaagaaagagaagatggatcta
gatgcccttgaagctgaggccaaatccgctggtttgggtgttggtgatcttggttctcgc
aatgataagacaaggcaggtcctcaaggaggaaaaggagagggcagaggcagagacaagg
agcaacgcttaccaggctgcttatgccaaggctgaagaggcgtccaaagcacttcgaccc
gagaaatctactaagaaccagagagaggaagatgatgcagtatttgatgatgatgatgaa
gagcttagaaaatccttagaaagagccagaaagcttgctttgagaaagcaagagggcctt
gccaaaacctttccagagtcaattgcttcacttgccgcttcccgttcaaatgactcaacc
atggataatccaagttctgtatctggagagtcgcacgagaacaaggttgtcttcacagag
atggaagagtttgtctggggtcttcagcttgatgaagaagaacaaaaacctggtagtgat
gatgttttcatggaggaagacgtgttgccaaaaccctctgatgaagaaatgaagaatgag
gatggtggttggaccgaggtgaaggaaaccaaggaagaggaaccctctgtaaaggaggag
gaaatggaagtagctccagatgagacgatacgtgaagtcccagttggaaagggtttatca
ggggttctcaaacttttgcaagatcgaggtacgctcaaggaagatattgactggggtggt
cgaaacatggacaagaagaagagcaagcttgtaggcatccgtagtgaggacgggaaaaag
gaaatacacattgaaaggactgatgaatatgggcgaatcctgactccaaaggaggccttt
cggttgctttcacataaatttcatgggaagggacctgggaagatgaagcaagaaaagcgt
atgcggcaataccaggaggagctgaagataaaacagatgaacaattcagatactccatca
cagtctgtggagaggatgaaagaagctcaagttcaatttaaaactccatatcttgttctc
agcggaaatgttaaaccagggcaaactagtgatcctagaagtggttttgctactgttgag
aaggatttgcctggaggtttgacccccatgcttggtgataagaaggttgagcactttttg
ggcataaaacgcaagcatgagccaggagaagggagctcacaaaagaagcccaaaacctaa

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