Lycium barbarum (goji berry): 132614331
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Entry
132614331 CDS
T09483
Name
(RefSeq) RING-H2 finger protein ATL78-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132614331
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132614331
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
132614331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf_RING_Vps8_fungal
zf-Nse
FANCL_C
Prok-RING_1
PHF5
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
132614331
NCBI-ProteinID:
XP_060184736
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All DBs
Position
10:complement(17722133..17723088)
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AA seq
233 aa
AA seq
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MATTTSTLFIQEFMENFHYSRRLLTEATMTLPLAATGIRHDQIDDDVPIGNVFDANVIMV
ILAVLASALICSLVLNSIIKCAFKCSSLILADSSSDHTNNPSAANRGIKKKALKTFPVIT
YTTELKHGIDYQCVICLSEFEVGEKVKVLPKCNHGFHVKCIDKWLNSHSTCPTCRHCLIE
TCQKIVNGSNFPSSNTLSSAAVQEIIIRIEPLQREGVVSNNQDLVEKIVVSRL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcaactactacttccactctattcattcaagaattcatggagaacttccactactca
agaagactactcacggaagccaccatgacgctgcctctggcggcaaccggaattaggcac
gaccaaattgatgatgatgtaccaattggtaacgtctttgatgcaaatgttattatggtc
atattggcagtacttgcaagtgccttgatttgttcacttgtgttgaactccatcataaaa
tgtgcatttaagtgctctagccttatattggcagactcatcctcagaccatacaaataac
ccttcagcagccaatagagggatcaagaaaaaggccctcaagacatttccagttataaca
tacactactgaattgaaacatgggattgactatcagtgtgtcatttgcttatcagaattt
gaagttggagagaaagttaaagttcttccaaagtgcaaccacggattccacgtcaagtgt
atcgataaatggctcaattcccactctacttgccctacttgcaggcactgcctcattgag
acttgccaaaaaattgttaacggcagtaattttcccagtagcaatactttatcatcagca
gcagtgcaagaaattatcataagaattgaacctctccaacgtgaaggtgtggtatctaat
aatcaagatttggtggaaaaaatagtagtatctcggctatag
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