Lycium barbarum (goji berry): 132614352
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Entry
132614352 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132614352
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
132614352
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
132614352
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
132614352
NCBI-ProteinID:
XP_060184761
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Position
10:123812268..123820396
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AA seq
676 aa
AA seq
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MMGKMEGKRLRRLVLFWFTIIIQLFSFHARHTSNDRNTPPHDRQRMIHSPPVKLHISNHY
VVIDNGIVQLTLTNPTGHISGVSYNGIDNLLEKRFPEPRRGYWDIMWKLPEDKSSTFDTL
FMKKFRVIKEDDNKVEVSFTKTWNSNAHHDLPLNIDKRFVMLRGSSGFYSYGKFERPEGM
PELRLDEARIAIKLSQKLFHYMAVSDDRQKVMPTDQDRIHGKVLSYREAVQIINPSNPNL
KNEVDDKYQYSSDVKDIKVHGWICDNPHVGFWVITPTYEYTSGGPMRQDLTSHAGPTSLA
TFFSGHYAGPELGVDLQQGESWKKVFGPVFFYLNSDSGNDHSTLWEDAKRQMFEETAKWP
YDFPESKDYPKANERATVKGRLLVNDRYVSKDLVYAKSAYVGLALPGDAGSWQTETKGYQ
FWTKADRTGHFKITGVIPGTYNLYAWVPGVIGDYKHNLNFTITQGCEFNLGRLVYNPPRN
GPTLWEIGIPDRTAAEFFVPDPLPSLSNHVLINIVQKFRQYGLWDRYTDLYPNEDLVYRV
GVSDYTKDWFYAHVTRRTENKEYIPTTWQISFELKNVDPNGTYAIHVALASATYSHLQGR
INRINRPRPNFETPGLGKSNAIARHGIHGLYSLFTFQIPGSDLQNGENIIYLKQAKGGSP
FIGVMYDYIRFEGPSQ
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaaagatggaaggaaagaggctacgacgactagttttattttggtttacaatt
attatccagcttttctcgtttcatgcaaggcacacttcaaatgacaggaatactccacca
cacgatagacaacggatgatacattctcctccggtcaaattgcacatctcaaatcactat
gtggtgatagataatggcattgttcaacttaccctaacaaatccaacgggacatatttct
ggggtaagttacaatggaattgataatctcctggagaaaaggtttccagaaccaaggagg
ggttattgggatatcatgtggaaacttccagaagacaaaagtagcacttttgatacgctt
ttcatgaaaaaattccgagttataaaagaagatgataataaagttgaagtttcttttaca
aaaacgtggaattccaatgctcaccatgatcttcctctaaacatcgacaaaaggtttgtg
atgctacgaggaagttcaggattttattcatatgggaaatttgaacgtccagagggaatg
cctgaacttaggctagatgaagccaggattgcaatcaagctcagtcaaaaattgttccat
tatatggctgtatcagatgataggcaaaaggtaatgccaacagaccaagatcgaattcat
ggcaaagttcttagctacagagaagctgttcaaattataaatccatccaatcctaatctc
aagaatgaggttgatgacaagtaccaatattcttctgatgtcaaggatatcaaagtacat
ggatggatttgtgataatccacatgtaggtttttgggtaattacaccaacttatgaatat
acaagtggtggaccaatgagacaagatcttacttctcatgctggtccaacatccctagct
acattttttagtgggcattatgctggtccagaattaggagtggatctccaacaaggagag
tcatggaaaaaagtatttggtcctgtctttttctatctcaactctgattctggcaatgat
catagcacactttgggaggatgctaaaagacagatgtttgaagaaactgcaaaatggcca
tatgatttcccagaatcaaaagactatcccaaagccaatgaacgggccacagttaaaggc
cgattgttggttaacgacaggtacgttagcaaagatcttgtctatgcaaaatctgcatat
gttggattagctctgcctggagatgctggatcatggcaaacagagactaagggttatcaa
ttttggactaaagcagatcgtactggacacttcaaaattactggagttatacccggaact
tataacttgtatgcatgggtccctggagttattggagattacaaacataaccttaacttt
accatcacccaaggatgtgaatttaatttaggtcgcttagtttataatccaccaagaaat
ggtccaactctatgggaaataggtattcctgatagaactgctgctgaattctttgtgcct
gatccattacctagcctctccaatcatgtcttaatcaacattgtacaaaagtttagacaa
tatggtttgtgggatcgttacacagatttatatccaaacgaagatttagtatacagagtt
ggtgttagtgattacacaaaagattggttctatgctcatgtaaccaggagaactgaaaac
aaggaatatataccaacaacatggcagatttcatttgaacttaaaaatgtggatccaaat
ggaacttatgcaatccatgtggcattggcttctgctacttactcccatttgcaaggaaga
attaacagaattaatagaccaaggccaaattttgagacccctggacttggaaaaagtaat
gcaatagcaagacatggaattcatggactgtactctctcttcacttttcaaattccaggg
tctgatttacaaaatggagaaaatatcatatatttgaagcaagctaaaggtggtagtcct
ttcattggagtcatgtatgattatattcgatttgaaggaccttcacagtaa
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